Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN12246

FASTA Sequence
Unigene ID: UN12246Length: 676 SSR 
GGGAGCTAACCATCTCTCTCTCCGCCGCAGCAATGGCTGCTCTCCGACACCCCGTCTTCACATCTCCTTCGACTATTCTTCCGTCC
TACTCCCCGAACGGTAAAAAAAGAGTCTCCTTCAAACTTATCCGCTGTTCTTCCCCGGCCTCAATTCCATTCTCGTCATCAAAAAG
GAAAAACTACCTGCGACCCAAAATCCTCAGAACCCTAGGTCCCACCAAGCCCCAGGAGATCGAACCGCCGCGAAAAGTTCCTCCAA
GAGAGGACGAAGTATTCACGAATAAGGACGATGATGTAGAGGAGCTCACCTCGGTTGTTGCTGCGCCGAACGAGGTGAATGGTGTG
TTCAGTAAGCTCTCTCCGAAGGTCGTTGTCAAGTACGGGTTGTGTCTGGTCGGAATGTTCGCTTTTCAGACGGTTTGCGCTGTTTT
GTTTCTGGGAAACTCGACGGAGAAAGCGCAGGATAAAAGTTCGAGTCTTTTGTTAGATAGCGATGCGGTGGTTTCGCTAGAGGATC
TTGAGATGAATGAGAAGATCGCAGAGATTAGAATGATGGCACGTGAGGCACGTCGAAGCGAGGAAAAGAGTGGTGGTGGTGGTGGT
GGTAGAGAAGAGGATGGTGGAGCGTTGAATCCTGGTGGAGGGGTTGAGATTGAGAAGAGATAGAAGCGAGGTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870207 hypothetical protein ARALYDRAFT_493302 [Arabidopsis lyrata subsp. lyrata]3442e-030
NP_193317 uncharacterized protein [Arabidopsis thaliana]2894e-024
CAB10360 hypothetical protein [Arabidopsis thaliana]2723e-022
XP_002275874 PREDICTED: hypothetical protein [Vitis vinifera]1854e-012

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O23433 Putative uncharacterized protein AT4g158202722e-022

Arabidopsis top hits (Blast detail)Scoree value
AT4G15820.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: emb1703 (embryo defective 1703) (TAIR:AT3G61780.1); Has 482 Blast hits to 408 proteins in 85 species: Archae - 0; Bacteria - 7; Metazoa - 192; Fungi - 38; Plants - 25; Viruses - 3; Other Eukaryotes - 217 (source: NCBI BLink).2892e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  33%
 
101  33%
 
81  33%

Unigene MembersMember information