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Information for unigene UN12262

FASTA Sequence
Unigene ID: UN12262Length: 1554 SSR 
GGGTGCCTCTCTCTCTCTCTCTCTGCTCTCTTCCTTCAAATCCGATTTCAGACAACCTTTTACTCGGACAGAAGATTTCTACTTTT
CAGTTATATAAGTTCCACTGAGGTTAACTTCTAATCTGCTGGCTAAAGAGTAGTGCTTGCCTGCCTGCACAAGTGGACAGTAACCG
AGGCTTCAAGTATTAGTTGAAGGACAGATGTCTCAACTGATGATGGCTGATACCAGTTCAAGGACTGATGTCTCAACTGATGGCGA
CACAGATCCTAGAGATCTGGGGTCTGATAGAGGGCAAATGATGCTTGCTGCTGCTTCTGATTCCAGTGGATCAAAGGATAAGTTGG
ATCAGAAGACTCTTCGTAGGCTTGCTCAAAATCGAGAGGCAGCAAGGAAAAGCAGACTGAGGAAGAAGGCATATGTTCAGCAGCTG
GAGAACAGTCGATTGAAGCTGACTCAACTTGAGCAGGAGCTGCAAAGAGCAAGGCAACAGGGGGTTTTCATCTCAAGCTCAGGAGA
CCAAGCCCATTCCACTGGTGGAAATGGGGCTTTGGCATTTGACGCAGAACATTCACGATGGCTTGAAGAAAAGAACAGGCAAATGA
ACGAGCTGAGATCTGCTCTGAATGCTCACGCAGGTGATGCTGAGCTCCGGATAATCGTGGACGGAGTGATGACTCACTACGAGGAG
CTATTCAGGATCAAGAGCAATGCAGCTAAGAACGATGTCTTCCACTTACTATCCGGAATGTGGAAAACACCGGCTGAGAGATGTTT
CTTGTGGCTTGGAGGGTTCCGTTCATCCGAACTTCTCAAGCTTCTTGCGAATCAGCTGGAGCCAATGACAGAACGGCAGGTGATGG
GCTTAAACAGCTTGCAGCAGACGTCTCAGCAGGCTGAAGATGCGTTGTCTCAAGGGATGGAGAGTTTACAGCAGTCATTAGCCGAT
ACTTTATCTAGTGGATCTCTTGGCTCCAGTTCTTCTGACAATGTCGCTAGCTACATGGGTCAGATGGCCATGGCAATGGGGCAGTT
AGGTACGCTCGAAGGATTCATCCGACAGGCTGATAACTTGGGGCTGCAAACACTGCAACAGATGATCAGAGTGTTAACAACGCGTC
AGTCAGCTCGTGCTCTTCTTGCCATACATGATTATACGTCTCGACTACGTGCGCTTAGTTCCTTGTGGCTTGCGCGGCCAAGAGAG
TGAACACACACAGGAATAGTGCTTTCCTCAGCTCTATACATAATCTTACAAACTCGATTTGGTAGGGATACTCCTTCCAAGAGATC
ACAAAGCAAAAGGCCTTCTCAGATTCTTCTTACCAAAAGCAATATTTTGGGAAAGAAGACTGCAGTTTTTGAAAATGGTTTTCTGA
TTGTGCTGTGTGTTGTAATCTTTAGCTAATAAGGTTGTGTAGTTTCTAGAGAGAGAGAGTGATTGTTCATAAATAGATTATCAGTG
TAAGGTGGTAGTAACCAACGTGACAGAAGATAAGATACTTTCAGGAACTTGGATTGTATGATGATCATAAGTCAAAAAAGACAAAT
AAGCCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566415 transcription factor TGA6 [Arabidopsis thaliana]15642e-171
BAD44579 bZip transcription factor TGA6 / AtbZip45 [Arabidopsis thaliana]15491e-169
BAJ34211 unnamed protein product [Thellungiella halophila]15168e-166
NP_196312 transcription factor TGA2 [Arabidopsis thaliana]14872e-162
ABR46137 bZIP transcription factor TGA2 [Arabidopsis lyrata]14853e-162

Swiss-Prot top hits (Blast detail)Scoree value
Q39140 Transcription factor TGA615649e-173
P43273 Transcription factor TGA214877e-164
Q39163 Transcription factor TGA513551e-148
Q41558 Transcription factor HBP-1b(c1) (Fragment)12441e-135
P23923 Transcription factor HBP-1b(c38)12143e-132

TrEMBL top hits (Blast detail)Scoree value
A1A6J5 At3g1225015641e-171
Q67X98 BZip transcription factor TGA6 / AtbZip4515498e-170
B2BDR5 BZIP transcription factor TGA214871e-162
B2BDX5 BZIP transcription factor TGA214852e-162
B2BDS4 BZIP transcription factor TGA214833e-162

Arabidopsis top hits (Blast detail)Scoree value
AT3G12250.1 TGA6 (TGACG MOTIF-BINDING FACTOR 6); DNA binding / transcription factor15656e-174
AT3G12250.2 TGA6 (TGACG MOTIF-BINDING FACTOR 6); DNA binding / transcription factor15656e-174
AT5G06950.1 AHBP-1B; DNA binding / transcription activator/ transcription factor/ transcription repressor14885e-165
AT5G06950.2 AHBP-1B; DNA binding / transcription activator/ transcription factor/ transcription repressor14885e-165
AT5G06950.3 AHBP-1B; DNA binding / transcription activator/ transcription factor/ transcription repressor14885e-165

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  20%
 
191  20%
 
181  20%
 
82  40%

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