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Information for unigene UN13340
FASTA Sequence |
Unigene ID: UN13340 | Length: 959 |
| SNP | GGACGTCACTCTTTCGATAATGCTCTCTCTCGTCGCCTCTCCTCCGGTAATCTCCGCCGCTTCTCTCTCTAAACCTCTCCGTTCTC
TCTCCAAATCCGCGCTCCCTCTCTCCAGAAGAGCCAGACCCATTTCTCCCTTTCCCCAAAACCGCTCGCTCCATCACCGTCTATAA
ATCTCCGATGAACAGCCTCTTCAACAGACTCGGATTCGGGTCTCGTCCCCAACCCGACCCGGCTTCCGCCGCAATCGCGCAAGGAC
CCGACGACGATGTCCCGTCTCCGGGTCAGCAGTTCGCGCAATTCGGCGCCGGCTGCTTCTGGGGAGCGGAGCTGGCTTACCAGAGG
GTCCCCGGCGTGACGAAGACGGAGGTCGGGTATAGCCAGGGGTTCGTCGACGGTCCGAGCTACGATGACGTCTGCTCGGAGACGAC
GGGGCATAACGAGATTGTTCGGGTTCAGTTCGATCCGAAAGAGGTCAGCTTTGAGAGCTTGCTCGATGTCTTTTGGAAGCGTCATG
ATCCGACCACGTTGAATCGCCAGGGGAATGATGTGGGGACGAGGTACAGATCAGGCATATACGTCTACACAGACGAGCAAGAGAAG
TTAGCTCGTGAATCTATGGAGAATCAGCAGAAGGTCTTGAACAGGAAGATTGTGACTGAGATACTTCCCGCCACGAAATTCTACAG
AGCGGAAAGTTACCACCAGCAGTACCTGGCAAAAGGTGGTCGCATGGGTCTCAGACAATCTGCTGAGAAAGGTTGCAACGATCCTA
TCCGATGCTATGGCTAAAAATGTAGTCAGTCTCTCGGTCATGTGTTACTTGTAATAAAGAGTAATGATGATGCATTATATGGAGTG
TAAAATACGTCACCACCGCAACAGTCTTGTGAATTTCATTCTGTAATTCTCAGTTTACAATAAACCATTATTTGTTATCTTTATAT
ATCAAAATTTTAT
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GenBank top hits (Blast detail) | Score | e value |
CAA62760 PMSR protein [Brassica napus] | 1118 | 5e-120 |
P54151 RecName: Full=Peptide methionine sulfoxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase; AltName: Full=Protein-methionine-S-oxide reductase | 1109 | 6e-119 |
XP_002867624 protein-methionine-s-oxide reductase [Arabidopsis lyrata subsp. lyrata] | 1040 | 6e-111 |
AAM65092 protein-methionine-S-oxide reductase [Arabidopsis thaliana] | 1027 | 2e-109 |
NP_194243 peptide methionine sulfoxide reductase A4 [Arabidopsis thaliana] | 1024 | 4e-109 |
Swiss-Prot top hits (Blast detail) | Score | e value |
P54151 Peptide methionine sulfoxide reductase | 1109 | 3e-120 |
P54150 Peptide methionine sulfoxide reductase A4, chloroplastic | 1024 | 2e-110 |
Q9SEC2 Peptide methionine sulfoxide reductase | 827 | 1e-087 |
Q9LY14 Peptide methionine sulfoxide reductase A3 | 795 | 7e-084 |
Q9FKF7 Peptide methionine sulfoxide reductase A1 | 789 | 3e-083 |
TrEMBL top hits (Blast detail) | Score | e value |
Q6QPJ4 Methionine sulfoxide reductase A | 920 | 3e-097 |
A9PFX3 Putative uncharacterized protein | 910 | 5e-096 |
B9R9Z9 Methionine sulfoxide reductase, putative | 885 | 4e-093 |
Q84L12 Peptide methionine sulfoxide reductase | 881 | 1e-092 |
C6TLL9 Putative uncharacterized protein | 859 | 4e-090 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT4G25130.1 peptide methionine sulfoxide reductase, putative | 1025 | 1e-111 |
AT5G07470.1 PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase | 796 | 5e-085 |
AT5G61640.1 PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase | 790 | 2e-084 |
AT5G07460.1 PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase | 702 | 4e-074 |
AT2G18030.1 peptide methionine sulfoxide reductase family protein | 252 | 5e-022 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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