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Information for unigene UN13340

FASTA Sequence
Unigene ID: UN13340Length: 959  SNP
GGACGTCACTCTTTCGATAATGCTCTCTCTCGTCGCCTCTCCTCCGGTAATCTCCGCCGCTTCTCTCTCTAAACCTCTCCGTTCTC
TCTCCAAATCCGCGCTCCCTCTCTCCAGAAGAGCCAGACCCATTTCTCCCTTTCCCCAAAACCGCTCGCTCCATCACCGTCTATAA
ATCTCCGATGAACAGCCTCTTCAACAGACTCGGATTCGGGTCTCGTCCCCAACCCGACCCGGCTTCCGCCGCAATCGCGCAAGGAC
CCGACGACGATGTCCCGTCTCCGGGTCAGCAGTTCGCGCAATTCGGCGCCGGCTGCTTCTGGGGAGCGGAGCTGGCTTACCAGAGG
GTCCCCGGCGTGACGAAGACGGAGGTCGGGTATAGCCAGGGGTTCGTCGACGGTCCGAGCTACGATGACGTCTGCTCGGAGACGAC
GGGGCATAACGAGATTGTTCGGGTTCAGTTCGATCCGAAAGAGGTCAGCTTTGAGAGCTTGCTCGATGTCTTTTGGAAGCGTCATG
ATCCGACCACGTTGAATCGCCAGGGGAATGATGTGGGGACGAGGTACAGATCAGGCATATACGTCTACACAGACGAGCAAGAGAAG
TTAGCTCGTGAATCTATGGAGAATCAGCAGAAGGTCTTGAACAGGAAGATTGTGACTGAGATACTTCCCGCCACGAAATTCTACAG
AGCGGAAAGTTACCACCAGCAGTACCTGGCAAAAGGTGGTCGCATGGGTCTCAGACAATCTGCTGAGAAAGGTTGCAACGATCCTA
TCCGATGCTATGGCTAAAAATGTAGTCAGTCTCTCGGTCATGTGTTACTTGTAATAAAGAGTAATGATGATGCATTATATGGAGTG
TAAAATACGTCACCACCGCAACAGTCTTGTGAATTTCATTCTGTAATTCTCAGTTTACAATAAACCATTATTTGTTATCTTTATAT
ATCAAAATTTTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAA62760 PMSR protein [Brassica napus]11185e-120
P54151 RecName: Full=Peptide methionine sulfoxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase; AltName: Full=Protein-methionine-S-oxide reductase11096e-119
XP_002867624 protein-methionine-s-oxide reductase [Arabidopsis lyrata subsp. lyrata]10406e-111
AAM65092 protein-methionine-S-oxide reductase [Arabidopsis thaliana]10272e-109
NP_194243 peptide methionine sulfoxide reductase A4 [Arabidopsis thaliana]10244e-109

Swiss-Prot top hits (Blast detail)Scoree value
P54151 Peptide methionine sulfoxide reductase11093e-120
P54150 Peptide methionine sulfoxide reductase A4, chloroplastic10242e-110
Q9SEC2 Peptide methionine sulfoxide reductase8271e-087
Q9LY14 Peptide methionine sulfoxide reductase A37957e-084
Q9FKF7 Peptide methionine sulfoxide reductase A17893e-083

TrEMBL top hits (Blast detail)Scoree value
Q6QPJ4 Methionine sulfoxide reductase A9203e-097
A9PFX3 Putative uncharacterized protein9105e-096
B9R9Z9 Methionine sulfoxide reductase, putative8854e-093
Q84L12 Peptide methionine sulfoxide reductase8811e-092
C6TLL9 Putative uncharacterized protein8594e-090

Arabidopsis top hits (Blast detail)Scoree value
AT4G25130.1 peptide methionine sulfoxide reductase, putative10251e-111
AT5G07470.1 PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase7965e-085
AT5G61640.1 PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase7902e-084
AT5G07460.1 PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase7024e-074
AT2G18030.1 peptide methionine sulfoxide reductase family protein2525e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  33%
 
101  17%
 
193  50%

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