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Information for unigene UN13407

FASTA Sequence
Unigene ID: UN13407Length: 976 SSR 
GATCCTAACTCTTCATTTATTTGAATCGATGAAAGTCTCAAGGTATATATATATAGTATATGGATTTAACTCTGCATCAACTTAAC
TTACAAGCTTTTTTCCATCATACACTGAGACCACTCTACTATAACAATTTCAACCTTAGATTTACTCGCGCATGCATCGTCAAACC
ATCTCCAAGGATTGTTGATAACAATAAGCCTCTCACAAACTCACTCTTTCTAGCCTTCTCTTGATCTTCTACCGTTAGTGGAGCTT
CTTGTATGCCTCTCTTGAGAGATTCCTTTTGCGAGAGTTTTGTAGTAAATTTGCTAGCAGACTCATTAGTAGCAGAAGGAGAACTA
AACATAAAGGATGACAGCAACGGATCAGATTCTATATTGGTTGGAGAAGTGAATCTTGAAGATCCACCAAGAAGAAGAGACTGTAG
GTTTGCTTCCCGTAGCTCTTTTTTCAAGGCGAGATAAGCAGAGCCGTATCCACCACTTTTTCTCAACCTTCTCCTTCGCTGCACCT
TAAAAAAGTTGGCATGTTGCGTCGTGATATGGCCGACGATATCTAATCCCACCCTCTTTGTGCATACAGGACAGACCCCGTTCTTG
GCCTCAACAGGATGCTCTTCATCAATGTGACAACAGAGCCCTACAATGTCGAAAAACTCCGCGCAAAACGGGCAGATAAACTCCGA
CTTTGATTCGTCTTCTCCTTCGAGATCCTCGTACCCTCCACCTATATACAAATCTGATCGGGATTGTTGACATCGTCTCGATGAGA
AAACGGAAGGATGATTGATCCATGAATTGGAATCCATTCTCCTCTGATTGCTACGAAAGATAAATAAAAAAACAGAGAAGAATTGA
GATGAAAGGAGAAAGAATTGAATGTGATGAAATGAACGAAACCCTAGAAGGACGGGAGATAGAGAGAGAGGAGAGAGGGGGAAGAA
CAACGGAAGGAGATGGAGAGAGAGAGAGAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34254 unnamed protein product [Thellungiella halophila]8892e-093
XP_002882492 hypothetical protein ARALYDRAFT_477991 [Arabidopsis lyrata subsp. lyrata]8775e-092
NP_187332 protein dehydration-INDUCED 19-4 [Arabidopsis thaliana]8561e-089
AAF63822 unknown protein [Arabidopsis thaliana]7361e-075
XP_002865722 predicted protein [Arabidopsis lyrata subsp. lyrata]7072e-072

Swiss-Prot top hits (Blast detail)Scoree value
Q8VXU6 Protein DEHYDRATION-INDUCED 19 homolog 48566e-091
Q9FJ17 Protein DEHYDRATION-INDUCED 19 homolog 77052e-073
Q84J70 Protein DEHYDRATION-INDUCED 19 homolog 34759e-047
Q6NM26 Protein DEHYDRATION-INDUCED 19 homolog 64632e-045
Q39083 Protein DEHYDRATION-INDUCED 194292e-041

TrEMBL top hits (Blast detail)Scoree value
B9MZZ9 Predicted protein5664e-056
B9HX91 Predicted protein5611e-055
C6SY55 Putative uncharacterized protein5422e-053
B9RFG1 Putative uncharacterized protein5413e-053
B9I720 Predicted protein5323e-052

Arabidopsis top hits (Blast detail)Scoree value
AT3G06760.1 INVOLVED IN: response to water deprivation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Drought induced 19 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: HRB1 (HYPERSENSITIVE TO RED AND BLUE); protein binding (TAIR:AT5G49230.1); Has 133 Blast hits to 133 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).8565e-092
AT5G49230.1 HRB1 (HYPERSENSITIVE TO RED AND BLUE); protein binding7104e-075
AT3G06760.2 INVOLVED IN: response to water deprivation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Drought induced 19 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: HRB1 (HYPERSENSITIVE TO RED AND BLUE); protein binding (TAIR:AT5G49230.1).6603e-069
AT3G05700.1 INVOLVED IN: response to water deprivation; CONTAINS InterPro DOMAIN/s: Drought induced 19 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: drought-responsive family protein (TAIR:AT5G26990.1); Has 167 Blast hits to 167 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).4758e-048
AT5G26990.1 drought-responsive family protein4632e-046

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  14%
 
65  71%
 
181  14%

Unigene MembersMember information