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Information for unigene UN13478
| FASTA Sequence |
| Unigene ID: UN13478 | Length: 1452 |
SSR | SNP | GGATCTTCTTCGCGTCGATCTCTCTCTCTCTCTCTGCTTGGATATTTTCTCTCCAGATCTCTCTCTCCCGTGTCAAATCTTCGAGA
TCTGAATATCTCCTCCTGAATCCTGAAGGGGGAAGGATGTACGGATTCGAGGCGCTTACCTTCAACATCCATGGCGGATACCTGGA
GGCGATCGTGAGGGGCCACCGTGCCGGCCTTCTCACCACCGCCGATTACAACAATCTGTGCCAATGTGAAAACCTAGACGACATCA
AAATGCACCTCTCCGCCACCAAATACGGCTCTTACCTCCAGAATGAACCGTCACCTCTTCATACGACCACAATCGTGGAGAAGTGT
ACGCTCAAGCTTGTGGATGATTACAAGCATATGCTTTGCCAAGCTACTGAGCCTATGTCCACCTTCTTAGAGTACATCAGATACGG
CCACATGATTGACAATGTGGTGCTGATTGTTACTGGAACTTTGCACGAGAGAGATGTTCAAGAGTTGATTGAGAAATGTCACCCTT
TAGGCATGTTTGACAGCATTGCCACGCTGGCTGTTGCTCAGAACATGAGGGAGCTCTATAGGTTGGTGCTTGTTGATACTCCTCTC
GCTCCATATTTTTCTGAGTGCTTGACATCTGAGGATTTGGATGACATGAACATAGAGATTATGAGGAACACCCTCTACAAAGCATA
CCTTGAGGATTTTTACAAGTTTTGTCAGAAACTTGGAGGGGCAACATCAGAGATAATGTCCGACCTTCTGGCCTTCGAAGCTGACA
GAAGAGCTGTGAACATCACCATCAATAGCATTGGGACTGAGCTAACAAGAGAAGACAGGAAGAAACTGTACTCCAACTTTGGTCTC
CTCTATCCATATGGTCACGAGGAGCTTGCTATCTGCGAAGACATAGATCAGGTTCGTGGTGTTATGGAGAAGTACCCTCCTTACCA
AGCAATATTCTCAAAGATGTCTTATGGAGAGAGCCAGATGCTTGACAAAGCATTTTATGAAGAAGAAAGTCAGAAGGCTTTGCTTA
GCCTTTGAGCAGCAGTTCCATTACGGGGTGTTCTTTGCGTACATGAGATTGAGGGAGCAGGAGATCAGGAACCTGATGTGGATATC
CGAGTGTGTTGCACAGAACCAGAAGTCGAGGATCCACGACAGTGTGGTCTACATGTTCTGAGTCCGGTAAGAAGTGAGAAAAAGCA
CATTAAAATGTGTAAATGTGTTTTTAACATTGGAGAACAAGAAGAAAGAACCTATTTGATTGCTGTTGGTTTTCTTCATTGCTCCG
ATTTGCCAGAGAAATCTGCGGTTTTTACATTTGACTGTGTACCCAAATCAGAATCTCTCCAATTTGTTTGTTTTGGCCATATCTTG
TTTGGTTCTCTATATTTACCAATAAAACTCTTGTAATAATATCAAACTACTTATTTATCATGGGTTTTTCTTGCCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189512 V-type proton ATPase subunit d1 [Arabidopsis thaliana] | 1563 | 2e-171 |
| AAG40030 AT3g28710 [Arabidopsis thaliana] | 1559 | 7e-171 |
| NP_189513 V-type proton ATPase subunit d2 [Arabidopsis thaliana] | 1553 | 3e-170 |
| ABN08957 H+-transporting two-sector ATPase, C (AC39) subunit [Medicago truncatula] | 1500 | 5e-164 |
| XP_002282568 PREDICTED: hypothetical protein [Vitis vinifera] | 1495 | 2e-163 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LJI5 V-type proton ATPase subunit d1 | 1563 | 1e-172 |
| Q9LHA4 V-type proton ATPase subunit d2 | 1553 | 1e-171 |
| Q8RU33 Probable V-type proton ATPase subunit d | 1456 | 3e-160 |
| P54641 V-type proton ATPase subunit d | 975 | 2e-104 |
| Q9W4P5 V-type proton ATPase subunit d 1 | 854 | 2e-090 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FE04 AT3g28710 | 1559 | 5e-171 |
| A2Q5T7 H+-transporting two-sector ATPase, C (AC39) subunit | 1500 | 3e-164 |
| A5ACR7 Putative uncharacterized protein | 1495 | 1e-163 |
| B6VAX6 Vacuolar ATPase subunit d | 1495 | 1e-163 |
| B7FIK1 Putative uncharacterized protein | 1490 | 5e-163 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G28710.1 H+-transporting two-sector ATPase, putative | 1563 | 9e-174 |
| AT3G28715.1 H+-transporting two-sector ATPase, putative | 1553 | 1e-172 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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