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Information for unigene UN13538

FASTA Sequence
Unigene ID: UN13538Length: 773  SNP
GATTGTTTTTAAGAAAAGAGAGCAAGACTATGGGAAGTCTACAGTTGAATGGTTCAGGCTTAGTAGCTTCTCTATCTCAGAAGCAT
ATCTTTAGCCACAAAACCAAACTTAGTCACCCCAAGTCGTCCTACTTACGCTCAAAACACAATGCCACCAGAGCCAAAACTATCCG
GGCCATAAGCACCGCACCAGCAAGCCAGCCTCCAGTCGCAGATGAGCTGAATGATGAACCTCCTGCTGTCGATTTTGCCTTCGTCC
ATTCGGTGTTGCTACCGGACGGGACACCGGACGTGCATTGGAGAAGAGCGTGCGGTGGACAGAAACTTAGAGACATAATGTTGGAT
TCTAACATCGAACTCTATGGTCCTTATAGTAAGCCCTTGTCAAACTGCGCAGGAGTAGGAACCTGCGCTACTTGCATGGTCGAGAT
TGTAAATGGAAAGGAGCTTCTCAACCCACGAACTGACATTGAGAAGGAGAAACTCAAAAGGAAACCAAAAAATTGGAGACTAGCTT
GTCAAACCAACGTGGGAAATCCAGATTCAACCGGATTGGTCGTCATACAACAATTGCCAGAGTGGAAAGCTCATGAATGGAATATC
CCTAAGAATTTACCTATTGATGATCCCGAAAGTTCTACGTGAAAGTACGATCCATTTGTTATTGTCTAGATCATGAAACAAATAAC
GATCTGTTCTTTTTAATCTTTGTCGATATTTAACCATACAACTAGCTATTTAGATAAACCTAAATGATTATATATAAAGATTATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002885131 hypothetical protein ARALYDRAFT_897928 [Arabidopsis lyrata subsp. lyrata]9705e-103
NP_188246 NDH-dependent cyclic electron flow 1 [Arabidopsis thaliana]9463e-100
XP_002515998 electron carrier, putative [Ricinus communis]6301e-063
XP_002299725 predicted protein [Populus trichocarpa]5987e-060
XP_002284206 PREDICTED: hypothetical protein [Vitis vinifera]5906e-059

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LU21 At3g162409462e-100
B9RQH9 Electron carrier, putative6301e-063
A9PFE5 Predicted protein5985e-060
C6T195 Putative uncharacterized protein5564e-055
C5X963 Putative uncharacterized protein Sb02g0335905332e-052

Arabidopsis top hits (Blast detail)Scoree value
AT3G16250.1 NDF4 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1); electron carrier/ iron-sulfur cluster binding9471e-102
AT4G32590.1 ferredoxin-related2929e-027
AT4G32590.3 ferredoxin-related2507e-022
AT4G32590.4 ferredoxin-related1701e-012
AT4G32590.2 ferredoxin-related1127e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  22%
 
116  67%
 
181  11%

Unigene MembersMember information