Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN13612

FASTA Sequence
Unigene ID: UN13612Length: 2100 SSR 
AAGTCGAACAGATATATTTGAAATAATAGCAACAAAAAGGTAGTGTATATTACATAATATAACGTCGTTATAATTATAAACACATT
ACAAGTCTACGCATATTTGAAAAGAATAAAACACTTTCTTCCCAAAGAATAATAAAGTTAACACTTACATTGTTATAAATTCAAGA
AAAGAGCATTTGAAAGCAATTATATTTTTTTTCTGGCTCAAGCCATCACTGCTCTCTTTCCTTTGCTGCTTTTGGTACTATCTTTC
TTCCTTCTTGAAATGCCTGTGATGGGATGACCCAGAGGACCTGACCAGGTCTGAACTTGCGTTGGCGGTTCATCTTTTGAAAAATT
GAAAGAAGTGGAAGTGAAGGACGAAGCCATGTCTGGTGGGACGAATGTCGGGTCTATGTGCTGCGAGGCCCCCAATGGTACCCCCA
TTGCTCCACCGTCCTGGTGTGGTGGTGGAAACTTCTCGCTCTTGCTTTTTGCGGTTGCGTGTGTGATTAATCTCCTCCTATCGACA
TTTGACTGAAGTTCTGCATTAGCTTCTGGAGCTGGAAGTGCTCTATTTGAACGATCTCTGTGCCTATTCTTCCTTGCACCATCTCC
TTGGGCTTTACTAGCAGCTCTTTGTCTCCGAGTTTCTTCATCTCGTCGCTTTGCATCCATTTCTTTGCTGGGTGGATACTTTGGGA
GATCAGCAGGTTCACAGGCATATGGGTCGCTTGTAAAGAATTCACTATGTAAAGCAGCAGTTGCAGTTTGGCGGTTCTCAGGTTCA
ATAGAAAGAAGGGAGTCAATGAGAGGAAGAGACGAAGGTGGAAAGTCTTTAAACGTCTCTCTAATGCATCTTGGGTATGGTTCACG
TGGTTTGTATATCGCTCCGTGTGTAAATTTTCCTTTTTTCCAGTAGTCCTCTGATGGTGAACCACATAGCTTGTAAATCTTATGGA
GCTGCTCCACCTCTGTTCGACCAGGCATAATAGGTCTTCCGGCCAAAAGCTCAGCTAAAATACAGCCGGCGCTCCAAAGATCAATA
CCAACACCATAGTCAGTGGCCCCAAGAAGAAGCTCGGGAGCTCGGTACCATAGCGTGACCACTCGGCTAGTCATGGCCCGCTTGTG
ATTAGGATCAAAAATAGTGGCCAGTCCAAAATCAGCAATCTTGAGGACCCCACCGTCGTCAATAAGAAGATTCGATCCTTTGATGT
CACGATGAAGCACACCACGGCTATGACAATGCTCCATACCAGATAACAACTGACGCATTAAACATTTCACCTCAGGTTGAGAGAAG
TTAACAAGAGGGCTAGAAGCAAGACCAGCCAAATCATGATCCATGTACTGAAACACAAGGTACAAGCTACAAGACATCCTGGAGGT
AACCAAACCTTCCAACTTAACCACATTGGGATGATCAAGCCTGCGCAGTACAAGAATCTCTCTAGCCATAAACTTGACGCTTTCAG
GCTCCAAGTTATCAAACCGAACCTTCTTAAGCGCCACGATTTTACCAGTCAGCATATCCTTAGCTTTGTATACATTACTGTACGTT
CCTTGTCCAATCTTATCGATCTTCTCGAAAGTGTCGGCCTTTCTAGGAACCCAGCCGTTAAGAGCTTCACCACAAGCATCAGAGAG
CCAAGAAGGCCAACCAGCAGCGACCTGTTCGCCTCGCCAATGCTTAGAGGGATTACTCAGGCGTGGGTTTGGCTTTGTTGACCTTC
TCCGATCTCCTTTTGATGGTTTCTTATCTTCCTTGGGAGGAGGAGCTTCTTCCTCGTCATGCTTCTTCTTCTCTACATCACTCGCT
TGCACAGTTTCTCCTGTTTTGGAGGTCTTTGCTAGTTTAATTTCAGATGTCGTCGCCGCCTTAGAGGACGAGAACACACACCCCAT
TGTTATCAAACGCTATGCTTTCAGCTTCCGAAACCCTAATCAAATGATTCCGACTTCCTCTCCATGGAAGCTCGAGCTTTGCGGTG
AGGAGAAGAAAAGAGAAGAACAGTGAGTTGAGGAATCTGACGGAGGAGTTGAGGAGCAGAGATCGAATCTTTGGAGGTTGAAACTG
TTGCTTGAGAGAGAGAGAGAGAGAGAGAGAGACTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175862 putative serine/threonine-protein kinase [Arabidopsis thaliana]26172e-293
NP_001117489 putative serine/threonine-protein kinase [Arabidopsis thaliana]26056e-292
XP_002512278 Serine/threonine-protein kinase cdk9, putative [Ricinus communis]21047e-234
CBI26114 unnamed protein product [Vitis vinifera]20383e-226
XP_002276606 PREDICTED: hypothetical protein [Vitis vinifera]20322e-225

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZVM9 Probable serine/threonine-protein kinase At1g5461026171e-294
Q5JK68 Cyclin-dependent kinase C-27046e-073
Q6I5Y0 Cyclin-dependent kinase C-16868e-071
Q8W4P1 Cyclin-dependent kinase C-26851e-070
Q9LFT8 Cyclin-dependent kinase C-16822e-070

TrEMBL top hits (Blast detail)Scoree value
B3H626 Uncharacterized protein At1g54610.226054e-292
B9REV9 Serine/threonine-protein kinase cdk9, putative21045e-234
B9HMN8 Predicted protein (Fragment)19872e-220
Q9LDC1 CRK1 protein19827e-220
A5ARV7 Putative uncharacterized protein19721e-218

Arabidopsis top hits (Blast detail)Scoree value
AT1G54610.1 protein kinase family protein26186e-296
AT1G54610.3 protein kinase family protein26186e-296
AT1G54610.2 protein kinase family protein26062e-294
AT3G05050.1 protein kinase family protein17971e-200
AT5G50860.1 protein kinase family protein15594e-173

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  10%
 
83  30%
 
113  30%
 
191  10%
 
72  20%

Unigene MembersMember information