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Information for unigene UN13649
| FASTA Sequence |
| Unigene ID: UN13649 | Length: 1118 |
SSR | SNP | GGACAAAAGAGGCTTATCTAGAATTACGAAATTACCAAAAGACCCCATCATCCTTCTCTCATCTCTGAAAGTATCGATCATCGAAT
TTGGGTGTGTGTGTGGAAATATCTTCTCTTCTAAAAAGCATCAAACTTTTCTTTGCTTCTGATCTTCGCCTTCTTCTTCTTCTTCT
TCTTCATCGCTGGAAATTGACGTTCCATGGCAAGAGTTTCGTTCAAGGATTCTCTGAAAGCTCTCGAAGCAGATATCCAACACGCT
AACACTGTAGCTTTAGATTATCCTCGGGAGAAGGATGGAGCTCGTGTTCAGATGAGGCTATCTTACAACCCGGCAGCTCAGTTTTT
ACTCTTTCTTGTCCAATGGACTGATTGCCACCTGGCCGGTGCACTCGGTTTGCTCAGAGTTCTCATTTACATGACCTATGCGGATG
GGAAGACCACAATGTCGGTTTACGAGAGAAAAACCAGTATTAAAGATTTCTATGCTGTGATATTTCCATCGCTGTTGCAACTAGAG
AGGGGCATCACAGACGTGGATGACCGCAAACAGAAAGAGGTCTGCAAAGTAAGGTACAGGAACAAAGAGGAGATGGAAAGAGTAAA
GCTCTCGGAGATTGACGTGGAGAGAGACGAAGAGTGTGGTATATGTATGGAGATGAACAGCATGGTTGTTCTTCCCAACTGTACAC
ATTCTTTATGCATCAAGTGTTACCGTGACTGGCATGGGAGGTCAGAATCATGCCCTTTCTGCAGGACAGTCTGAAGAGAGTGAACT
CAGGGACCTGTGGATGTTGATGGAGAATCAGATACGTCAGTCTCCATACAGTGGAGAGGGAGAATAAGAAGAGGCTGTTTGTGTAC
ATAGAGAAGCTTCCTCTAGTGGTTCCAGATCAAGTGTTTGCTTCTTCTCCTTACGATTGCCATGTCAAGTGAGTAAGATTAATAAG
AAGAAGAAGAAGAGCTTTTATAAAAGGCTAAACCGGTTCTGGTAAACCTTTATATGAATGTATATATAATGTTTTTTTTTTTTTTT
TGTTCAAGTATATATAATGTTTTTAGAGTAGTAGTAAGTAAGTAAGTAATAATAATATAGTAACCATTCTCTTGGGGAAGTCCATT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_190300 RING/U-box domain-containing protein [Arabidopsis thaliana] | 942 | 2e-099 |
| AAM67171 RNA-binding protein-like protein [Arabidopsis thaliana] | 942 | 2e-099 |
| XP_002525634 ubiquitin-protein ligase, putative [Ricinus communis] | 836 | 3e-087 |
| NP_001190025 RING/U-box domain-containing protein [Arabidopsis thaliana] | 834 | 6e-087 |
| XP_002313384 predicted protein [Populus trichocarpa] | 831 | 1e-086 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L8R1 RNA-binding protein-like protein | 942 | 1e-099 |
| Q9SD57 At3g47160 | 942 | 1e-099 |
| B9SI15 Ubiquitin-protein ligase, putative | 836 | 2e-087 |
| B9HP46 Predicted protein | 831 | 9e-087 |
| A5BMW9 Putative uncharacterized protein | 737 | 7e-076 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G47160.1 protein binding / zinc ion binding | 942 | 7e-102 |
| AT5G58787.1 zinc finger (C3HC4-type RING finger) family protein | 825 | 2e-088 |
| AT5G01520.1 zinc finger (C3HC4-type RING finger) family protein | 716 | 1e-075 |
| AT5G01520.2 zinc finger (C3HC4-type RING finger) family protein | 654 | 2e-068 |
| AT5G58787.2 zinc finger (C3HC4-type RING finger) family protein | 431 | 1e-042 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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