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Information for unigene UN13690

FASTA Sequence
Unigene ID: UN13690Length: 656  SNP
GGAATATCTCGGATTCTCTCAACCCATCTCTATCGCTTCTTCCCCCTATAACCTTCTCTCGATCTACTCTCCATCGCAAAACCTAA
CAACAATGAGTCAGTACAATCAACCTCCCGTCGGCGTTCCTCCTCCTCAAGGCTATCCACCGGAGGGATACCCGAAGGATGCGTAT
CCACCGCAGGGGTATCCTCCTCAGGGGTATCCGCCTCAGGGATACCCTCAGCAGGGGTATCCTCAGCAAGGCTATCCTCCTCCTTA
CGCCCCGCAGTATCCTCCTCCCCCTCAGCATCAGCAGCAGCAGAGCGGACCTGGGGTTCTAGAAGGATGTCTGGCTGCTCTCTGCT
GTTGCTGTCTCTTGGATGCTTGTTTCTGATGATTGGAGTACCTGCTTTTGGAGCCGGTGATTTGATTGCAACAGAGTGTTTGGCAA
CTTTAATTAAGTAATGGGCATTGTAATGGAATTGCTGGATACATTCTCTTGTCTATTCCTCTTTTTCCGGTTTATGTTCTTAGATT
CACAAACAACTTATTCAATGGCTTGGTTTGGATTTGAGACTTTAAAATGGGAATGTAAATTTGCGTGGAGATACTAAGTCCTTTAC
CTCTCAGTCTTATGTGTTTTTGATAATTCATATCTCAATGATTCGGTTTACTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_181673 proline-rich uncharacterized protein [Arabidopsis thaliana]5376e-053
XP_002881775 expressed protein [Arabidopsis lyrata subsp. lyrata]5261e-051
XP_002267098 PREDICTED: hypothetical protein [Vitis vinifera]3422e-030
XP_002492787 Protein involved in positive regulation of both 1,3-beta-glucan synthesis and the Pkc1p-MAPK pathway [Pichia pastoris GS115]2652e-021
CCA39602 Meiotically up-regulated gene 8 protein [Pichia pastoris CBS 7435]2652e-021

Swiss-Prot top hits (Blast detail)Scoree value
Q8S8M0 UPF0467 protein At2g414205373e-054
P09241 Rhodopsin2291e-018
Q6BH13 Metacaspase-12211e-017
A5PLE2 UPF0467 protein C5orf32 homolog2121e-016
Q8LCL8 UPF0467 protein B2067e-016

TrEMBL top hits (Blast detail)Scoree value
A9NLR5 Putative uncharacterized protein4102e-038
C4R4X2 Protein involved in positive regulation of both 1,3-beta-glucan synthesis and the Pkc1p-MAPK pathway2651e-021
B7FMM9 Putative uncharacterized protein2552e-020
Q0D319 Rhodopsin (Fragment)2453e-019
A9V0Y5 Predicted protein2435e-019

Arabidopsis top hits (Blast detail)Scoree value
AT2G41420.1 proline-rich family protein5382e-055
AT5G67600.1 unknown protein3008e-028
AT3G49845.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: XYPPX repeat (InterPro:IPR006031); Has 14038 Blast hits to 7746 proteins in 541 species: Archae - 8; Bacteria - 1083; Metazoa - 5225; Fungi - 1793; Plants - 3748; Viruses - 424; Other Eukaryotes - 1757 (source: NCBI BLink).2927e-027
AT5G17650.1 glycine/proline-rich protein1896e-015
AT1G09070.1 SRC2 (SOYBEAN GENE REGULATED BY COLD-2); protein binding1261e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
125  25%
 
67  35%
 
102  10%
 
72  10%
 
84  20%

Unigene MembersMember information