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Information for unigene UN13790

FASTA Sequence
Unigene ID: UN13790Length: 1040 SSR 
GGAGGCGTATTTTAGCCGTCCGCCATTTCCATCGCTCTCTCCCTCTCTCTCTCTCTCGTTTTCTCTGCTCATCACTATAACGACGG
CCTCTCTTCTGCATCATCTGATCTGATTTCGATGGCTGCACCACCTGCTAGGGCTAGAGCCGATTACGATTACCTCATCAAGCTCT
CTTATCGGTGACAGCGGTGTGGTAAAAGTTGTTTGCTGTTGAGGTTCTCTGATGGCTCTTTCACCACTAGCTTCATCACCACCATT
GGGATTGATTTTAAGATAAGAACTATTGAGCTTGATGGCAAACGCATCAAGCTTCAGATTTGGGATACTGCTGGTCAAGAACGTTT
TCGAACCATCACCACTGCTTATTACAGAGGGGCAATGGGCATTTTGCTGGTGTATGATGTCACAGACGAGTCATCCTTCAACAACA
TTAGGAACTGGATTCGTAACATCGAGCAGCACGCTTCCGACAATGTCAACAAGATCTTGGTAGGGAACAAAGCCGATATGGACGAG
AGCAAGAGGGCCGTACCAAAAGCAAAGGGTCAAGCACTTGCTGATGAATACGGAATCAAGTTCTTTGAAACAAGTGCCAAAACAAA
TTTAAATGTGGAGGAAGTTTTCTTCTCGATAGCAAAGGACATTAAGCAGAGACTCGCAGATACTGACTCCAGGGCAGAGCCTTCGA
CGATTAGGATCAGCCAAACCGACCAGGCTGCTGGAGCCGGACAGGCTACGCAGAAGTCTGCATGCTGTGGAACTTAAAAAGTCCCA
AAAATTTTCTGAAGGTGAAAAAGAAAAACTGATTGTTCTTGGCTGCGTTTGTAGTTCTTTTTTACTTTGATGATGATTTGGTTTTA
AGTTGGCATTCTTAGCTTGTTCTGATGGTAATAGAGTCTTGAAGAAATCGTTCATTCTCAGATAGATTCGATCTCTGAATTTGATT
CTGTGGCAACATTGTTAAAACTCAAATCTCGTTATTGTCTTTTGTCTTTCTCTGTTACAACATCAATTCTTAAAAAGCTTTTCCCT
TTTAGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_200792 Ras-related protein Rab-8A [Arabidopsis thaliana]10228e-109
XP_002866353 hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp. lyrata]10173e-108
NP_190192 Ras-related protein ARA-3 [Arabidopsis thaliana]10139e-108
BAJ34629 unnamed protein product [Thellungiella halophila]10093e-107
NP_190929 RAB GTPase-8 [Arabidopsis thaliana]9932e-105

Swiss-Prot top hits (Blast detail)Scoree value
P28186 Ras-related protein ARA-310134e-109
Q39433 Ras-related protein RAB1BV9132e-097
P20790 Ras-related protein Rab-8A6854e-071
P20791 Ras-related protein Rab-8B6783e-070
P36861 GTP-binding protein yptV26442e-066

TrEMBL top hits (Blast detail)Scoree value
Q9FJF1 Putative GTP-binding protein ara-310226e-109
O24466 At3g536109931e-105
A5C254 Putative uncharacterized protein9851e-104
B9GER9 Predicted protein9804e-104
A9P9D8 Predicted protein9795e-104

Arabidopsis top hits (Blast detail)Scoree value
AT5G59840.1 Ras-related GTP-binding family protein10232e-111
AT3G46060.1 ATRAB8A; GTP binding10143e-110
AT3G46060.2 ATRAB8A; GTP binding10143e-110
AT3G46060.3 ATRAB8A; GTP binding10143e-110
AT3G53610.1 ATRAB8; GTP binding9946e-108

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  14%
 
121  14%
 
105  71%

Unigene MembersMember information