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Information for unigene UN13976

FASTA Sequence
Unigene ID: UN13976Length: 1140  SNP
GAAAGTAATTTGAATTCTTCAATCTTAAAAGTCTTTTATAAACGTGCTCATATGAATAAAGAATCAGAACATTTAAATTTAAAACT
TCAGTTGTTTGTGTATAAACAATATGAAAGTTTTAAGGCAAATACAAAAGAATCCAAGTCCATGTAAAGAAGAGAAAGCAAAACCC
TTAAGAGCACAAACATATTACATGAGATCAGATCTCCCATTTCTTGAGCTCCATACCATCAGGAGGAGTGCTCTCGATCTTCTTAG
CTCCAACCTCTTTCCAGTCTGTTGAGAGCACTGTCCCATTAGATTCCACAAATGATTTGCTCATTGCACGCCTCATATCCTCATCA
GCATTTGAATATATCTCACGGAAGAACTTGTTCAAAGCCGCGTCTCCTTCCAGCTTCTCATCCTTCTCCTGTTTCTTCACTTCTGC
TTCAAGCTTGTCCCAGTCCTTAACTCTCTTGGAAGAAGGATAAGCCGGTCTCATTGAAACCTCTGTTGAGACATTAGGCTTTGGCA
AAACCGCTGGCCCTTTGCCGTGTTCAAGAGAGGCCCATGTGATGATCTCTGCTTTTGCTAGACGGATCTCAATCTTGGTTGACATT
ACTTCATATCTGCACTTCTCTGGTACTATCTTTCCAAACAGTCTCGGTTGGAGATGATAAGCTTCTTCTCCAGGAACATCAATCAC
AACACTCAGAATCTGTTCACCAAAGTCGATGTTAACATTCTGCTTCTGTATCCCTTTTGCAAATACAGTTACCACAACTTCTTCTG
GCTTCTGGTAGTATTCATGTCTGAACTTTGGTTTGGAGGGTTCTGCAGGTACAGGGGTCTGATCAACTTTTACTGGCTGTTGAACA
AATCTTTCTCTTTTCTGAGATTCGAAGATCACATTCATCAATCAACTTCTTGAATTTGGATTCATTTGGTGCAATGGAAGCACCCT
TTTCAAGAGCTGTTTTCGCAGTTCGGTACTCTTCAAGCTTCATACAGGCAGTTCTTTTTCTTAAGTAAGCTTTGGTCAATGAAGGA
TCCAACTCAATAGCTTTCTTCGCATCTGCCACAGCTTCTGCTCCCCCAAGAACACAAATCAGAGTCAGACCCAATGAATGAGCGAC
ATATATATGCATCAAACTTGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACC91268 phosphatase-related protein [Capsella rubella]10229e-109
BAJ34132 unnamed protein product [Thellungiella halophila]10148e-108
AAL33611 SGT1a [Arabidopsis thaliana]9691e-102
XP_002869774 SGT1A [Arabidopsis lyrata subsp. lyrata]9663e-102
CAC85267 SGT1-like protein [Arabidopsis thaliana]9611e-101

Swiss-Prot top hits (Blast detail)Scoree value
Q2KIK0 Suppressor of G2 allele of SKP1 homolog4955e-049
Q9Y2Z0 Suppressor of G2 allele of SKP1 homolog4902e-048
B0BN85 Suppressor of G2 allele of SKP1 homolog4822e-047
Q9CX34 Suppressor of G2 allele of SKP1 homolog4803e-047
Q55ED0 Protein SUGT1 homolog3092e-027

TrEMBL top hits (Blast detail)Scoree value
B2WS96 Phosphatase-related protein10226e-109
Q8W515 SGT1a9699e-103
Q84LL4 SGT1-like protein (Fragment)9618e-102
Q9SUR9 Phosphatase like protein9618e-102
Q9SUT5 AT4g11260/F8L21_509269e-098

Arabidopsis top hits (Blast detail)Scoree value
AT4G23570.1 SGT1A; protein binding9623e-104
AT4G23570.2 SGT1A; protein binding9623e-104
AT4G23570.3 SGT1A; protein binding9623e-104
AT4G11260.1 SGT1B; protein binding9265e-100

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
106  67%
 
61  11%
 
82  22%

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