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Information for unigene UN14628

FASTA Sequence
Unigene ID: UN14628Length: 927  SNP
GGGTGATTACTCGGGGAAGAAAGAAGGCAACTCGCCGCTGTATTCGAGACGGAGAAGTAAAAAATGTTGAGAAGAGTGATCGGTAA
CGTCGCAGTCCGGCGTCAATTTCAAAGAGCCTTATCCAGCAAATCAGGTGGAAGCGGAAAGCCAAGCGACGTTTCAGCCGCCGTCG
ATTCGATGCTACTCCGTTCCCTAAAGGAACATTACCTAGAAGTCTCCAAGATGACTCCTCCTCCCAAAGTGACACCTCCTTCACCG
TTCGAGATTGTGAAAGGATCGCTCGAGGGAACCGGCGCTGTTCTGAAGAAATCTGTCGGAAACGAAGAGATCAGCCTCTTCGTGAT
GAGGCTTGCTCACGGAGGTGGTGATGATGAAGACGAGGATGGGATTAACCAGCTGTTCCTCCACGTGGCTGTGTCGAAGCCGAACC
AGGCTGAGTCTCTTCATTTCCTTTGCGGGCTTTACCCGGATGCGTTGGGTATTCACTCTGTTTCCATGAGGCCGAAGCTCGAGGAT
TTGGAGTTGTCTGATGATCCTGCTCGTTACACTGGCCCTTCTTTTGAAGAGCTGGATGAGAAGATGAGAGACGTATTCCATAGCTT
CCTGGAGGAGCGAGGTGTGAACGAGAGTCTCTTCCCGTTTCTTCAGGCATGGCTCTATGTAAAGGATCATCGTAACTTGCTGCGAT
GGTTCAAATCAGTTGGCACGTATGTGCATGAGAACCCATCTGCGGAAACGCCTAGGGGATGATCTCAATCAGAAAGACACATCTTT
CTTTCAGTCTTTTGGTAGAGGTTTATGCGGTTAATTGTTTTGACAAGGCACTTTACCGCTCTTATATGATGCAGTTCCAGGGACCG
AGTGACTTTTGTTTCTTTCAGAGCGTTCTTTCAAGAAACATATACATCAGTTATGTTCTTTAAGAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867234 hypothetical protein ARALYDRAFT_328472 [Arabidopsis lyrata subsp. lyrata]10612e-113
CAA18600 putative protein [Arabidopsis thaliana]10442e-111
NP_001078481 Mitochondrial glycoprotein family protein [Arabidopsis thaliana]10405e-111
AAM65459 unknown [Arabidopsis thaliana]10397e-111
XP_002526319 conserved hypothetical protein [Ricinus communis]7493e-077

Swiss-Prot top hits (Blast detail)Scoree value
O94675 Mitochondrial acidic protein mam331406e-008

TrEMBL top hits (Blast detail)Scoree value
O65538 Putative uncharacterized protein AT4g3261010441e-111
Q8L7K1 AT4G32605 protein10404e-111
Q8LAC7 Putative uncharacterized protein10395e-111
B9SK00 Putative uncharacterized protein7492e-077
B9HVI3 Predicted protein7196e-074

Arabidopsis top hits (Blast detail)Scoree value
AT4G32605.1 LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: mitochondrial glycoprotein family protein / MAM33 family protein (TAIR:AT3G55605.1); Has 195 Blast hits to 195 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 64; Plants - 99; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).10402e-113
AT3G55605.1 mitochondrial glycoprotein family protein / MAM33 family protein1962e-015
AT1G80720.1 mitochondrial glycoprotein family protein / MAM33 family protein1891e-014
AT5G05990.1 mitochondrial glycoprotein family protein / MAM33 family protein1711e-012
AT1G15870.1 mitochondrial glycoprotein family protein / MAM33 family protein1665e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  29%
 
73  43%
 
101  14%
 
121  14%

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