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Information for unigene UN14846
| FASTA Sequence |
| Unigene ID: UN14846 | Length: 489 |
| SNP | GGGACTCAAGAAGGAAATAAAGCTAACCTTAATTTGTTCAAGAAACATGTCCAAGACACCACCAGAGAAACAAGAGTTACCACTAG
AAACGAGTCCGTACACAAAGTACGAGGATATTGAAGATTACAAGAAGAACGCTTATGGAACTTCTGGTCACCAGGAAGTTAAGCCT
GGCCAAGGCGGTGGCGCAACAGACGCACCGACGCTCTCAGGCAGTGCTCCTCCCTCCGCTATAGATTCAGCTAACCAACAAGCTAA
GAAGTGAATCACACATTATCACAGAACAAACATGTTCCCTTGCTTTCTTATATGATGCTTTTGCGATAGTTGATTTGGTTTTTTTT
CTTATCTGTTGTTATGATCCAATCCAATCTAATCAATTGATCGATGCTGAAGTCTAAGAGAATTTGACCATCTTCCGACAGATTAT
ACGCTACATGTATAAAAATATTAGATAAAGAATAACATATGTTCCAAGTCCTAACGCTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAS47599 At2g33690 [Arabidopsis thaliana] | 322 | 1e-028 |
| XP_002879465 hypothetical protein ARALYDRAFT_482317 [Arabidopsis lyrata subsp. lyrata] | 321 | 2e-028 |
| NP_180925 Late embryogenesis abundant protein, group 6 [Arabidopsis thaliana] | 312 | 2e-027 |
| XP_002273160 PREDICTED: hypothetical protein [Vitis vinifera] | 198 | 3e-014 |
| ADQ91847 late embryogenesis abundant protein group 8 protein [Arachis hypogaea] | 198 | 3e-014 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6NLU9 At2g33690 | 322 | 9e-029 |
| O23658 Putative uncharacterized protein At2g33690 | 312 | 1e-027 |
| B9T4J9 Putative uncharacterized protein | 197 | 3e-014 |
| Q9S7N8 Putative uncharacterized protein | 191 | 1e-013 |
| O24439 PvLEA-18 | 186 | 6e-013 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G33690.1 late embryogenesis abundant protein, putative / LEA protein, putative | 313 | 2e-029 |
| AT2G23120.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein 18 (InterPro:IPR018930); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23110.1); Has 25 Blast hits to 25 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 151 | 9e-011 |
| AT2G23110.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein 18 (InterPro:IPR018930); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23120.1); Has 25 Blast hits to 25 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 146 | 4e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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