Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN14887

FASTA Sequence
Unigene ID: UN14887Length: 1141  SNP
GGTTAACAATGGAAAGTTTTGCAAACCCAAACTAAGGAGGTACACCAAACATTCTTCCAGTTACACCAAATGTTCTGGTAATGCGT
GCAATAAAAGAGACGACTACAAGGGTCGAAACATCAAGAAACTAAAAATAGAGGAACCCAATAATTTGAAACATTCTCCCCGGTTT
TGCCTCTAAACTTCTCAACCTGATCATGTATAACCCTGCCTATATTTTCTGAAAATATCCTCGGTTTCCGCGTTTCGGAACGCGCA
GCAGCCAATTATATAAACGATTATCGACCCGATTAACGCCAACAGAAGAAAGATATCTGCCTTTAACCAATCAACCTTAAGATTTT
GAAGCAAACCGGCTTTGCACGAATCACAAGCGTAGCACAAAGCGTTTTGGTCATTGCTCCACTGTAGACAATCCATATCTGCATTC
ATATCTATGGGACTTATCCAGTAAGTAGGGTTCACGAATGTGAATCCACATTTTGTTGGGGGCTTGCAGCATCCAGATTGAATGGG
ACTAAGATGAGCATTGAAGAAATCTAGAGCCGAAGTATATGTCTGATTCAGTTCAGGACAAATACTAGTAGTACTCAAACAAGTAC
GGATCCTATCCCATTTGTAAGATCTCTGAACACGTCGACGCAAGTAACCAGAGAAATCTTGAAGACTATACTCAAGATAAGCTCTG
CTTGGTTCCGGATGACCAGAGCCTTTAATGGTGACCATGTAAATAAATCCGACAAGAATACCTAAAAGTACTATGAGAACAAGCAT
GGCCATCAAGTAAACAATGAGAAGCCAAGTGATTCTCCAGAACCCTCCTATGAAACCAGCAAGACCGACAAGAAGGATCAAGACTC
CGAGGATTATTACTGGCCACTGAAGGAGCTTCACACAGGAGTTTACTTCTCCGGTGGCAAGCCAGATCCCGGCGCCGATGACCGGA
ACTGAGAGGAGGACGGAGATGAAGTTTATGCAACCGATTACATTGTTGCTTAAAGGCATTTTTTGGGAAGAGAGGAAGATAGACTC
TTTTGTGTTTTTGAAATCTGTTTGGGTTAAGAAAGGGATTTAACAACAATCGTGATAACTTAGGGAGAGAGAAAAAATGGAGCGAG
AGAGATAGAAGATCCACATTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002865168 hypothetical protein ARALYDRAFT_494309 [Arabidopsis lyrata subsp. lyrata]13453e-146
NP_199482 Tetraspanin family protein [Arabidopsis thaliana]13392e-145
AAL49918 putative senescence-associated protein 5 [Arabidopsis thaliana]13382e-145
XP_002326727 predicted protein [Populus trichocarpa]11341e-121
ABK93187 unknown [Populus trichocarpa]11331e-121

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FIQ5 At5g4670013391e-145
Q8VYM8 Putative senescence-associated protein 513381e-145
B9MU32 Predicted protein11347e-122
A9P9Y4 Putative uncharacterized protein11339e-122
B9GZ87 Predicted protein11176e-120

Arabidopsis top hits (Blast detail)Scoree value
AT5G46700.1 TRN2 (TORNADO 2)13405e-148
AT2G19580.1 TET2 (TETRASPANIN2)7609e-081
AT2G23810.1 TET8 (TETRASPANIN8)6093e-063
AT3G45600.1 TET3 (TETRASPANIN3)6031e-062
AT4G28050.1 TET7 (TETRASPANIN7)5824e-060

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  50%
 
103  38%
 
91  13%

Unigene MembersMember information