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Information for unigene UN16157
FASTA Sequence |
Unigene ID: UN16157 | Length: 1622 |
| SNP | GTATCTAATTGATATATCAAATCTTTATAACCGTTTACGGAAATACATTCTTCATGTTTCTCTATGTGCAAGTATAAGGTTTTACA
GGAGTATCTACATATTACATTTGTATGTTCATCCCACTCTGGTCTCTATATACAATGACCTAGATTTATTGAACACAAAACATCTA
AAAGAATTTGACTCTCTTTTAAGGTTTTTTCTTTGCAGAACAAAATGATATGTTTCAAGAATATTATCAGAGTTCTCTACCTCTAC
TTCGAGCAACCAGACCCTTTCTCTTATCAAGTTTGCAGAGAACATGACAAAACTTCATGGCCAAGAACACGACTCCTTTGGCTTTA
ACACTCAAGAACTTGAGCATTATCTGCTGATCTTGGCCAGCTGCAACCACTGGACCACCCCAACACACCCGAGATCAGATCCACCT
TTGCGCAAACGCTAACCAAACTTTCAGTGTTTGCTTCTATTTGAAACAACATTACTGCTAATCCTCTTCCTCTGTCAATCTCGGCC
ACGCAAGAACATACTGTGATGCCTTCAGCTGCAAGGACTGTTGTAACCTCTGCGATTATGCCTTTACGAGCCATGGATACAACACA
TAACCACTCGATGGAGTGACCTTCCAGATGATGCCATGAGTCGATTTTACTGGCTCGCCAACTCTCTAAACCGGGCAACACTTCTT
TGTAAGCAGGGATGTTAGCAGGAAAAATCTTGGCAATTCCATCTCCAGGTGAGAAAAACTCTGGATTCTCCAAACTAGAGTTCTTG
ATGGCTTTGTTGTGTTTCCCATTCACTTTTGGGACCCAAACGCTTCCGTTTTGAGAAGCGGGTGTTGCGTTTCTGCTTTTGTCTTG
TGACTGGAACTGCTTAACATTAACGAGAATTTTCTCCCACCACTGTAGGCTCTTTCTTGAATCTTCTGTGAGATCTTCCACGTCAC
TGTCAGAGTCCGCCACAAAGTCATTCACTCGATCCTGGGTTATTTCTGCAGCACATTGCGCAGCTTGCTCCCTTAGGAATCTCATA
ATCTTGTGTCTTGCACTCCTTGTTTTGGCATGTTGCAACCACTGTTTATGTCTCTGGAAAGCAGATTTGCTTGAGAGGGCGTTGTA
GGTGAGAATCTCCACGACCTCGGCATTCTCAAGAACGTGCGTTGGAGAAACAAGATTACCATTCACCTTTGCTGCTACCATCTTGT
TTCCGATTTCCGTGTGAATCAGATAAGCGTAGTCAACAACGGTGGCCCCTTTAGGAAGGTTCTTTATCTCTCCTTTAGGTGTGAAT
ACAAACACACGACTACCTAAGAGATCCCGCGTAATAGTATCCACAAATTCTCTAGAGCTCATGTTACCCACAAACTCCTCTTGCCA
TTCCCTAATTGCATTTAGCCATCCGATCCTGAGTGCAAAATCTGTATTGCTGAGGCAACCTGTCTTCCCCCTTGACGTTTTACTTA
AAGGAACCGGATTTCCAGCTAATTCAGCAGAAAGAGCCCTGCCATTGTAGTAAACAGCTATACCCCTTTCAGCTATCAAGTCCATC
TCCTCCGTTCTGATCTGAATCTCCAGCCGAAACATACTCTCATACAAGAACGGAATCACAGTAGTATGGAGGCC
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GenBank top hits (Blast detail) | Score | e value |
XP_002874925 hypothetical protein ARALYDRAFT_490346 [Arabidopsis lyrata subsp. lyrata] | 2047 | 2e-227 |
NP_567226 RelA-SpoT like protein RSH1 [Arabidopsis thaliana] | 2027 | 4e-225 |
NP_849287 RelA-SpoT like protein RSH1 [Arabidopsis thaliana] | 2027 | 4e-225 |
BAE99068 RSH1 [Arabidopsis thaliana] | 2020 | 3e-224 |
CAB80719 putative GTP pyrophosphokinase [Arabidopsis thaliana] | 1864 | 4e-206 |
Swiss-Prot top hits (Blast detail) | Score | e value |
P52560 GTP pyrophosphokinase | 288 | 8e-025 |
O54408 GTP pyrophosphokinase | 285 | 2e-024 |
O52177 GTP pyrophosphokinase | 275 | 3e-023 |
Q5HNR8 GTP pyrophosphokinase | 263 | 7e-022 |
Q8CS97 GTP pyrophosphokinase | 263 | 7e-022 |
TrEMBL top hits (Blast detail) | Score | e value |
Q9M5P7 RSH1 | 2027 | 3e-225 |
Q0WUY0 RSH1 | 2020 | 2e-224 |
Q9M112 Putative GTP pyrophosphokinase (Fragment) | 1864 | 2e-206 |
Q3EAC8 Putative uncharacterized protein At4g02260.3 | 1666 | 2e-183 |
B9SAV1 Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative | 1587 | 3e-174 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT4G02260.2 RSH1 (RELA-SPOT HOMOLOG 1); catalytic | 2028 | 1e-227 |
AT4G02260.1 RSH1 (RELA-SPOT HOMOLOG 1); catalytic | 2028 | 1e-227 |
AT4G02260.3 RSH1 (RELA-SPOT HOMOLOG 1); catalytic | 1666 | 1e-185 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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