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Information for unigene UN16178

FASTA Sequence
Unigene ID: UN16178Length: 1008  SNP
GGCCAAACCCAAGAAGAAGCTAACTACGAAACTTCTCAGTTTCACTTCCTTCTTCTATATAATCTCCCCCAATCTCAAATCAAAAA
GTCCACAACACAACACAATCAAAACCACAAACCAACGACTCCAAAGTTTCATTTATGGCTTTTTCACAAGACCAATCAGCTTTGGA
CCTCATAACTCAACACCTCCTTACCGATTTCCCTTCCTTAGAGACTTTCGTTTCTAGCATCCATCAGAGCACCACCTCCACTCTAA
GCCAACGCAAGCCATCTCTTGCCACCATTTCAGTTCCTACTACTAGCAGCGGTGGTTCAAGAGGATGATCATAGGCATTACAGAGG
CGTGAGGCGTAGACCGTGGGGTAAGTACGCGGCTGAGATCAGAGACCCAAACAAGAAAGGTGTTCGTGTCTGGCTAGGTACTTTTG
ACACGGCCGTGGAAGCTGCAAGAGGTTACGATAGAGCTGCTTTTAAACTAAGAGGAAGCAAAGCCATTCTTAACTTCCCACTCGAA
GCAGGTAAGCACGAGGACTCTGGAGATGACGACAACAACAAGAAGACTGTGGCTTTGAAAGCTAAGAGGAAGCGATCAGAAACAGA
GGATGAAAAACATGGGATAAACCTGATCAGCCATAAAGCTGTGAAAAGGGAAGAGACAGAAGCTCAGGGTGAGGCTTGTCCGTTGA
CACCGTCAAGTTGGATGGGGTTTTGGGACGGAGTAGACGGTATAGGGATGGGACTATTCTCTGTCCCTCCGTTATCTCCTTATCCA
TCTCTAGGACATTCTCAACTCGGGGTTAAGTAAGCTTATTGATGGAGGTGACATCCGCAACTTTGGATTATAAACCATCGGCAAGC
AAACACACAAATAAGATAGTAATTATATACACATAAAGGACTGTACTCAAGATTCCTCATGGAGTGAATTAGTTTTTTTAGCTTGA
TTGATTGTAACTGCTTTGTTATATTCATTCGTTCTTCTCAATGCAATAATCTCAACTCTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002865846 hypothetical protein ARALYDRAFT_495189 [Arabidopsis lyrata subsp. lyrata]6867e-070
AAM64362 contains similarity to ethylene responsive element binding factor [Arabidopsis thaliana]6778e-069
NP_568755 ethylene-responsive transcription factor ERF105 [Arabidopsis thaliana]6697e-068
BAA97381 unnamed protein product [Arabidopsis thaliana]4941e-047
XP_002332694 AP2/ERF domain-containing transcription factor [Populus trichocarpa]4886e-047

Swiss-Prot top hits (Blast detail)Scoree value
Q8VY90 Ethylene-responsive transcription factor ERF1056792e-070
Q40478 Ethylene-responsive transcription factor 54273e-041
Q9FKG1 Ethylene-responsive transcription factor ERF1044212e-040
Q9LW48 Ethylene-responsive transcription factor 54077e-039
O80341 Ethylene-responsive transcription factor 53315e-030

TrEMBL top hits (Blast detail)Scoree value
B9NBQ9 AP2/ERF domain-containing transcription factor4884e-047
B9GK34 AP2/ERF domain-containing transcription factor4778e-046
D5L143 AP2 domain class transcription factor4331e-040
D5L0Y8 AP2 domain class transcription factor4312e-040
C6TBA4 Putative uncharacterized protein4302e-040

Arabidopsis top hits (Blast detail)Scoree value
AT5G51190.1 AP2 domain-containing transcription factor, putative6792e-071
AT5G61600.1 ethylene-responsive element-binding family protein4211e-041
AT5G47230.1 ERF5 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5); DNA binding / transcription activator/ transcription factor3314e-031
AT4G17490.1 ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6); DNA binding / transcription factor3135e-029
AT5G07580.1 DNA binding / transcription factor3101e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
106  40%
 
67  47%
 
82  13%

Unigene MembersMember information