|
Information for unigene UN16493
FASTA Sequence |
Unigene ID: UN16493 | Length: 1378 |
| SNP | GGGGGCCTCACGAACCATTCTCAGACACTCAAAGACTTCAAATAAGACCTTCTCTTCAGTTTGCTCAGAGAGTGAACCAATAAGCA
TGGCGAAGATGATGATGATGCAACAGAGCCAGCCTTCTTTATCTCTCCTTACTTCTTCTCTCTCTGACTTTAATGGCGCCAAGCTC
AACCTACAAGTCCAGTACAAGAGGAAAGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGCGAGAAGAAGATTCTTAT
AATGGGTGGCACTCGGTTCATTGGTATCTTCTTGTCCAGGCTCCTTGTCAAAGAGGGACATCAGGTTACATTGTTCACAAGAGGTA
AATCTCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATTTTTCTTCCAAGATTCTTCACTTGAAAGGAGAC
AGAAAGGACTATGACTTTGTGAAGTCAAGTCTTTCAGCTGAAGGCTTCGATGTTGTTTATGATATCAACGGGAGGGAAGCTGAAGA
AGTTGAGCCCATAATAGAGGCACTTCCTAAACTAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTGAAATCTGATGTCT
TGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAAGGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAGGT
GTAAACTGGACTTCTATACGTCCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTTGAAGAATGGTTCTTCCACCGTCTCAA
AGCTGGTCGACCTATCCCAGTTCCAAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAAGGACTTGGCAACAGCCTTTCTTG
CCGTGCTTGGTAACGAGAAAGCCAGCAGAGAGATATTCAACATCTCAGGAGAGAAGTACGTCACCTTTGATGGCTTAGCAAAAGCT
TGCGCAAAGGCTGGTGGGTTTCCAGAGCCAGAGATTGTTCACTACAACCCTAAAGAGTTCGACTTTGGGAAGAAGAAAGCCTTCCC
TTTCCGTGACCAGCATTTCTTTGCCTCGGTGGAGAAAGCAAAGCATGTCTTGGGATGGAAACCAGAGTTCGACTTGGTGGATGGTC
TCACTGACTCATACAACCTCGACTTCGGTCGTGGAACTTTCAGAAAAGAGGCGGATTTCACTACTGACGACATGATTCTAAGCAAG
AAGCTTGTTCTTCAATAGAAACATTCTTGGCTTGTATATGGTTGTGTGTTTGATCTCAAACTGAAGAAGATTCTCAAGTTTATCGT
CGTCTCAAATGTATTTTCTGTATGGATTGTGTTCGAGTTTTTTCTATAAAAAAGAGGCGCGCGGTCTGAATATTTTTTTCTACAAA
CC
|
|
|
GenBank top hits (Blast detail) | Score | e value |
BAJ33886 unnamed protein product [Thellungiella halophila] | 1926 | 2e-213 |
NP_172405 RNA binding protein [Arabidopsis thaliana] | 1916 | 3e-212 |
AAL32648 g5bf protein [Arabidopsis thaliana] | 1912 | 8e-212 |
CAA71589 g5bf [Arabidopsis thaliana] | 1910 | 1e-211 |
AAM65150 putative RNA-binding protein [Arabidopsis thaliana] | 1910 | 1e-211 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9SA52 Uncharacterized protein At1g09340, chloroplastic | 1916 | 1e-213 |
Q9LYA9 Uncharacterized protein At3g63140, chloroplastic | 515 | 3e-051 |
TrEMBL top hits (Blast detail) | Score | e value |
B9RFM2 NAD dependent epimerase/dehydratase, putative | 1715 | 4e-189 |
A9PJN1 Putative uncharacterized protein | 1701 | 2e-187 |
B9I6P3 Predicted protein | 1696 | 6e-187 |
A9PGZ8 Putative uncharacterized protein | 1692 | 2e-186 |
A5AIE0 Putative uncharacterized protein | 1689 | 4e-186 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT1G09340.1 CRB (CHLOROPLAST RNA BINDING); binding / catalytic/ coenzyme binding | 1917 | 8e-215 |
AT3G63140.1 CSP41A (CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA); mRNA binding / poly(U) binding | 515 | 3e-052 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|