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Information for unigene UN17006

FASTA Sequence
Unigene ID: UN17006Length: 1212 SSR 
GGATTACATCTCTCTCTCTCTCTCTCGCTCTCAGTTTTGTGAGACTGTTTCTTTGTTAGGGGTTTCTTAGGTATTTTTCCTTTAAA
AGCTCTCTTAGGGTTTTGTGAAGAATCTTTGTCGTACGTCTCCCCTTGTACGCACAGTTCTATAAGCGAGACAAGGACTGTTCTTG
CGTTGTAACAATAACCAATGGAAGGTTGTCCAAGAAACAGAGAAACATGTCCTAAACTCCTTGATTTGATTCATCAAGAAAGAAAA
TGGTACCATGACGAAGAGAAGAACAACAGCACAGATCAAGAAAAGAAACTTGAGCTAAGGCTTGCACCACCTGGTGGTGACGAAGA
AGATGGTTCTGCGATGAAGAAGAAGAACGTAGACACAAGAAACAACATCAAGAAGGAAGCAGAAGAGAAATCTATCTTCAATCTCA
GTGGAAACCATTTATCTTATTCCAATAAAACCACTTATGCTCCTCCTCACATCTCTCATAAAAGAACTGCTCCTGGTCCAGTGGTG
GGATGGCCTCCGGTTCGTTCCTTCAGAAAGAATCTAGCGAGCTCAAGCTCTTCAAAGCTCGGAAACGATCAAATCAACAAAAGTGG
TGATGAAGAGAAGCAAGTTCAACCTAAGAGGGAAGGAATGTTTGTAAAGATCAACATGGATAGTGTTCTAATAGGTAGAAAAGTCG
ATCTCAATGCTTACAGTAGCTACGAACAGCTATCTTTTGCCGTTGACAAACTCTTCAGAGGTCTACTCGCAGCTCAAAGAGATGCC
TCTGGTGGTGAAGGAGAGGGGAAACCGATCATTGGTTTATTGGATGGTAAAGGAGAATTTACTTTAACATATGAAGACAATGAAGG
AGACAAGATGCTTGTTGGGGATGTTCCTTGGCAAATGTTTGTTTCAACTGTGAAGAGACTGCGCGTGATTAAAAGCTCTGAGATTT
CATCTGCCTTGAGATTTGGATGCAGTAAGCAGGACAAGATGAAGAACTGAAGAGGCTTTCAGAAACTTATGTCTATCTCGAAGGGT
CTCACAGTTTTTAATATGTACATTAGGATTTTGTTATAAAGAGATAATGATTGGCTTTGTCCAGAGAGACATTTGATCTGATCTTT
GATATAATCTTCCCATGTTTTTAAGACACTCAACTATGAGATTACGGAAGCGATATGTGTGTAAGAAAGCATTTAATTTACAAAAT
GCTTTTAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34060 unnamed protein product [Thellungiella halophila]11861e-127
XP_002885143 hypothetical protein ARALYDRAFT_897963 [Arabidopsis lyrata subsp. lyrata]10731e-114
NP_188271 auxin-responsive protein IAA26 [Arabidopsis thaliana]10703e-114
AAM65282 phytochrome-associated protein 1 (PAP1) [Arabidopsis thaliana]10685e-114
AAC99772 phytochrome-associated protein 1 [Arabidopsis thaliana]10282e-109

Swiss-Prot top hits (Blast detail)Scoree value
Q8LAL2 Auxin-responsive protein IAA2610701e-115
O24408 Auxin-responsive protein IAA186183e-063
Q6H543 Auxin-responsive protein IAA74552e-044
Q9LG86 Auxin-responsive protein IAA24428e-043
Q8LQ74 Auxin-responsive protein IAA64231e-040

TrEMBL top hits (Blast detail)Scoree value
D3K0J7 Indole-3-acetic acid inducible 26 (Fragment)8068e-084
Q2VWA3 IAA186185e-062
B9RQE0 Auxin-responsive protein IAA6, putative5721e-056
Q0E2L7 Os02g0228900 protein4554e-043
A5AXB4 Putative uncharacterized protein4501e-042

Arabidopsis top hits (Blast detail)Scoree value
AT3G16500.1 PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1); transcription factor10718e-117
AT1G51950.1 IAA18 (INDOLE-3-ACETIC ACID INDUCIBLE 18); transcription factor6192e-064
AT2G33310.1 IAA13; transcription factor3163e-029
AT2G33310.3 IAA13; transcription factor3163e-029
AT2G33310.2 IAA13; transcription factor3154e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  22%
 
122  22%
 
101  11%
 
82  22%
 
92  22%

Unigene MembersMember information