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Information for unigene UN17043

FASTA Sequence
Unigene ID: UN17043Length: 1021  SNP
GTGGCAACGTTTTTAAGCAAACCGTTCGAATGTTTGTGTCAGCAACAATAAACATGGTGCATTACATACAAAGTCATGTAGCATTT
AACAGTTGGGATAATATGTCGAAATGTCCTTTTCTAGTAACATATAACAAAAGAGCAAAAGGCAAAGCAGAGACAAGCAGCAATGC
AAAAATCTGTGAGGTAAAGCTGGTTGATCAGTCAGAGTCAGAGTCCAGATTCTCTGAAGACCTAACCGAACGCCTTATGCTCTCTT
GGTATTCAGCATCTTCATCATCTTCCTCTTTCTTCTTCTTGCTGAGCATTCCTTTTTTAATCAGAACGTTCTCCAATTTGGTAGTG
GTGAAATCATCCTTTGTGCCAAGATCCTGGAACCCAACAAGCCTATCTATCGCAATTCCCTTGCTGAAAAGCAAAACGCAAGGCAA
GGTCTTTATTGCTAGTTTCGTGACAAAGAAAGGAGCATTCTCTGCGTCAACTCTAATGAACTTAGTGTCCACATGTCTAGGGGCAA
GAGTCTTCAGATGCTTGTCCATAATCTTGCAGCGGTAAAACTCCTTGTGGTAGAAATGACAAATAACTTTGGGACTCGTGGTGACT
TCCCCCAAGAAATCACCCTCGGTTACCTCTCGATATTCACCATGTCCTTGTCTTTTGAACGCTTCTCTCTTCTCAACTTCTCTCTT
GAGTGCAGCAATCCTATCAGCGTGCAACTTTTCTAGCTCTGGATCATCCATGAGATCATCAAGATCAACCTCCTCATTCACATGAT
TCGATGATTGCGCCTTCTCATTTGCAAGAACTTCCTTTTTGTAATCTCTGGCAGCTGCAGCCAATACGTTTCCGAAGGCCAGATTC
GAGAGGGTCGACTTTACTGCATCCGGATCCATCTTTAGTGCCCCCTCAAAAAGATATCTACGCTCCTCCGAGATTTTTCTTACCGG
TGATAAATTATAAACAGAGTGAGCAATCCAAAATTGGAGTGTTTCTTATTGCCTTCAATTTCAAATCTGAAGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_190665 phosducin-like protein 3 homolog [Arabidopsis thaliana]11088e-119
XP_002866758 hypothetical protein ARALYDRAFT_496965 [Arabidopsis lyrata subsp. lyrata]10854e-116
NP_569033 phosducin-like protein 3-like protein [Arabidopsis thaliana]10792e-115
BAB10917 unnamed protein product [Arabidopsis thaliana]10641e-113
XP_002877782 hypothetical protein ARALYDRAFT_323657 [Arabidopsis lyrata subsp. lyrata]9861e-104

Swiss-Prot top hits (Blast detail)Scoree value
O18883 Thioredoxin domain-containing protein 93745e-035
Q9CQ79 Thioredoxin domain-containing protein 93745e-035
Q8K581 Thioredoxin domain-containing protein 93728e-035
O14530 Thioredoxin domain-containing protein 93692e-034
Q71A37 Phosducin-like protein 33522e-032

TrEMBL top hits (Blast detail)Scoree value
Q6NPL9 At3g5096011086e-119
Q8LCV1 ATP-binding protein-like protein10791e-115
Q9FJZ8 Similarity to ATP binding protein associated with cell differentiation10647e-114
A9PEP1 Predicted protein9714e-103
B9S6A8 Thioredoxin domain-containing protein, putative9402e-099

Arabidopsis top hits (Blast detail)Scoree value
AT3G50960.1 PLP3a (Phosducin-like protein 3 homolog); beta-tubulin binding11093e-121
AT5G66410.1 PLP3b (Phosducin-like protein 3 homolog); beta-tubulin binding10806e-118
AT3G25580.1 thioredoxin-related3467e-033
AT2G18990.1 TXND9 (THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 HOMOLOG)3441e-032

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
96  60%
 
112  20%
 
82  20%

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