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Information for unigene UN17162

FASTA Sequence
Unigene ID: UN17162Length: 894  SNP
GGACTACCGCCGAAACCAAACCAAACCAACAAGATGGGACGAAGACCAGCGAGATGCTACCGTCAGATCAAGGGCAAACCCTACCC
GAAATCCCGCTACTGCCGAGGTGTACCCGACCCCAAGATCCGAATCTACGACGTCGGGATGAAGAAAAAGGGAGTCGACGAGTTCC
CCTTCTGCGTCCACCTCGTCTCCTGGGAGAAGGAGAACGTCTCCAGCGAAGCCCTCGAGGCCGCGCGTATCGCCTGCAACAAGTAC
ATGGTCAAATCCGCCGGGAAAGACGCGTTCCATCTGAGGATTAGGGTTCACCCTTTCCATGTTTTGCGTATCAACAAGATGCTTTC
GTGCGCCGGAGCTGATAGGCTTCAGACTGGTATGAGAGGTGCGTTCGGGAAGGCTTTGGGGACTTGCGCTAGGGTTGCGATTGGGC
AGGTGCTTTTGTCTGTGAGGTGTAAGGATAACCATGGGGCTCATGCTCAGGAGGCTCTTAGGAGGGCTAAGTTTAAGTTCCCTGGT
CGTCAGAAGATCATTGTTAGCAGGAAGTGGGGATTCACTAAGTTCAACCGTGCTGACTACACGAGGTTGAGACAGTCGAAGAGGAT
TGTTCCTGATGGTGTCAATGCCAAGTTTCTGTCGAACCATGGTCGTTTGGCTAACCGTCAACCTGGAAGCGCCTTCATTTCAGCCA
CCAGCGATTAAGGATGGAGATGATTTTTGGTTGTAGAACCTATCATCATCTAGTTTCTGAATATCTTTTTGTTTTGTTTTGTTTTT
GTTGTAACAAGGATCCTATTATGGTTTCATTTTGCTATGACAATTGCTTTAAGTTCAGTTTATGGATTATGTTTTTTTATACCTCA
AAGTTTATCAAGTTCCTTTTCCAGTTCTCGTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564878 60S ribosomal protein L10-3 [Arabidopsis thaliana]11347e-122
NP_174013 60S ribosomal protein L10-2 [Arabidopsis thaliana]11104e-119
XP_002893373 60S ribosomal protein L10 [Arabidopsis lyrata subsp. lyrata]11061e-118
NP_563945 60S ribosomal protein L10-1 [Arabidopsis thaliana]11033e-118
CAA78856 Wilm's tumor suppressor homologue [Arabidopsis thaliana]10952e-117

Swiss-Prot top hits (Blast detail)Scoree value
Q93W22 60S ribosomal protein L10-311343e-123
Q08770 60S ribosomal protein L10-211102e-120
Q93VT9 60S ribosomal protein L10-111031e-119
Q9M5M7 60S ribosomal protein L1010294e-111
P93847 60S ribosomal protein L1010223e-110

TrEMBL top hits (Blast detail)Scoree value
Q2HIH6 At1g2691011103e-119
B9SED8 60S ribosomal protein L10, putative10271e-109
C5WTC9 Putative uncharacterized protein Sb01g01547010261e-109
C6SVF4 Putative uncharacterized protein10252e-109
D2DMN0 QM-like protein10252e-109

Arabidopsis top hits (Blast detail)Scoree value
AT1G66580.1 60S ribosomal protein L10 (RPL10C)11352e-124
AT1G26910.1 60S ribosomal protein L10 (RPL10B)11102e-121
AT1G14320.1 SAC52 (SUPPRESSOR OF ACAULIS 52); structural constituent of ribosome11031e-120
AT1G14320.2 SAC52 (SUPPRESSOR OF ACAULIS 52); structural constituent of ribosome4192e-041

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  20%
 
82  10%
 
123  15%
 
97  35%
 
74  20%

Unigene MembersMember information