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Information for unigene UN17193

FASTA Sequence
Unigene ID: UN17193Length: 1015  SNP
GGAGAGCATAAGCTAAGTGTACAAAACATTTTGTAACTATACCAAGTTTTTTTTTTTGTGAAACTAACTATACCAGTTCTAAATAC
ATATATAAATACAAACCACATGCTTTAGCTCTCTATCACACACATACATCTCCTCCATCCATCACACAACAAGTAAGATAAAAAGA
AACCTTTTCACCAATGTCCAAAGACTGTGAGAAGCACGGAGGAGGCGGGGGAGGAACCGCCAGGAGAATATGCGGAGTGATCATCG
GCTTCATCATCATTGTCTTGATAACAATCTTCCTCGTCTGGGTAATCCTCCAGCCGACAAAACCAAGATTCATCCTCCAAGACGCC
ACCGTCTTCGCCTTCAACCTCACGCAACCTAACCTCCTCACCTCAAACTTCCAAGTCACGCTCGTTATACGAAACCGAAACTCCAG
GATCGGAATCTACTACGACCGTCTTCACGTCTACGCCACTTACCGGAACCAGCAAATCACTTTCCCTACGGCCATTCCACCGAGCT
ACCAAGGCCATAAAGAAGACAGTGTTTGGTCTCCTATTATCTACGGAAACGCCGTCCCCGTCGCTCCTTATAACGCCGTCGCTCTC
GGAGACGAGCAGAGTCGTGGGTTTGTTGATTTGGTTATACGCGCTGACGGGCGCGTGAGGTGGAAGGTCGGGACTCTTATTACCGG
GAAGTATCATCTTCATGTTCGTTGTCATACTTTTATCAATCTTGCGGATAAATCTAACGGAGTTATTGTCGGAGAAAATATCGTTA
AGTACACTGTGGACTACCAATGCAGTGTCGACGTTTAGATGACGGTGAAATGGGATACAGCTCTGACGCCGTTAAGTTTGCTTTTT
TTCTTTATTCACTCGTTTTTCTGCTACTCTTTGCTTCTGTATCGTTTAATTTGTCTACTTTTATCATTATCTCGTAAACTATACCA
CTCATGACATTACAGTGTCGCTAAATTATTTTAAATGAACTATAACTTACATCTCAGATAATTTTGTGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_181140 NDR1/HIN1-like 12 protein [Arabidopsis thaliana]9232e-097
XP_002879584 hypothetical protein ARALYDRAFT_482567 [Arabidopsis lyrata subsp. lyrata]9223e-097
XP_002876147 hypothetical protein ARALYDRAFT_485614 [Arabidopsis lyrata subsp. lyrata]8821e-092
BAJ34290 unnamed protein product [Thellungiella halophila]8821e-092
ABB36604 hairpin-induced 1-like protein NHL18B [Brassica napus]8651e-090

Swiss-Prot top hits (Blast detail)Scoree value
P87179 Cell wall integrity and stress response component 11254e-006

TrEMBL top hits (Blast detail)Scoree value
Q9SJ54 At2g359609232e-097
A9NI58 Hairpin-induced 1-like protein NHL18B8659e-091
A9NI57 Hairpin-induced 1-like protein NHL18A8586e-090
B6SGY4 VAMP protein SEC228586e-090
Q9SVC8 Putative harpin-induced protein8362e-087

Arabidopsis top hits (Blast detail)Scoree value
AT2G35960.1 NHL129247e-100
AT3G52470.1 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein8379e-090
AT4G09590.1 NHL227912e-084
AT2G35970.1 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein7813e-083
AT3G11660.1 NHL17212e-076

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
813  16%
 
1112  15%
 
911  14%
 
610  13%
 
1010  13%
 
1216  20%
 
77  9%

Unigene MembersMember information