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Information for unigene UN17295

FASTA Sequence
Unigene ID: UN17295Length: 3285 SSRSNP
ACTCGGTCACTGACGAACCACTGAGTTAACTCGTTCCTTTGGAGGAGAGGTTTTGGTAGGCGACAACAAATGGAGGAGCTAGATCG
TTCACGCGCTTTCGCTAAAGACGTCAAGCGTATCGTCGTTAAGGTTGGAACCGCTGTTGTAACTGGGAAAGGTGGAAGATTGGCTC
TTGGTCGCTTAGGAGCTCTCTGTGAACAGCTTGCGGAATTAAACTCGGATGGATTTGAGGTGATATTGGTGTCATCTGGTGCGGTT
GGTCTTGGCCGCCAAAGGCTTCGCTACAGACAGTTAGTCAATAGCAGCTTTGCTGATCTTCAGAAGCCTCAGCATGAACTTGATGG
GAAGGCTTGTGCTGGTGTTGGACAAAGCAGTCTCATGGCTTATTATGAGACTATGTTTGACCAGCTTGATGTGACGGCGGCTCAGC
TACTGGTGAATGACAGTAGCTTCAGAGACAAGGAGTTCAGGAAGCAACTCAATGAGACAGTCAAGTCCATGCTTGATCTGAGGGTT
ATTCCTATTTTCAATGAGAATGATGCTATTAGCACCAGAAGAGCTCCTTATCAGGATTCCTCTGGCATCTTTTGGGATAACGACAG
CTTAGCTGCTCTATTGGCGCTGGGACTGAAGGCTGATCTTCTGATTCTTCTGAGTGATGTCGAAGGTCTTTACACTGGTCCTCCTA
GTGATCCTAACTCAAAGCTGATCCACACGTTCATCAAGGAAAAACATCAAGATGAGATCACATTTGGCGACAAGTCAAGACTAGGA
AGAGGAGGCATGACTGCTAAAGTGAAAGCTGCAGTGAACGCAGCTTATGCTGGCATCCCTGTCATCATAACCAGTGGGTATGCAGC
TGAGAACATAGATAAAGTCCTTAGAGGACTGCGTGTTGGAACCTTGTTCCATCAAGATGCTCGTTTATGGGCTCCTATCACTGATT
CTACTGCTCGTGACATGGCTGTTGCTGCAAGGGAAAGTTCCAGAAAGCTCCAGGCCTTATCTTCGGAAGATAGGAAACAAATACTG
TATAGTATCGCCGATGCTCTTGAAGCAAATGAGAAAACAATCAGAGCTGAGAATGAATTAGATGTGGCTACAGCACAAGAAGCTGG
ACTTGAAGAGTCATTGGTGGCTCGTTTGGTTATGACACCTGCAAAGATCTCGAGCCTTGCAGGTTCAGTTCGTAAGCTAGCTGATA
TGGAAGATCCAATTGGCCGTGTTCTAAAGAAAACTGAGGTGGCAGATGGTCTTGTTTTGGAGAAGACATCATCCCCATTAGGCGTA
CTCTTGATTGTTTTTGAGTCTCGACCTGATGCACTTGTACAGATTGCTTCACTTGCCATCCGAAGTGGAAATGGTCTTCTACTGAA
GGGTGGAAAGGAGGCCAGGCGATCAAATGCTATCTTACACAAGGTGATCACTGATGCAATTCCAGAGACTGTGGGTGGTAAACTCA
TTGGACTTGTGACTTCAAGGGAAGAGATTCCTGATTTGCTCAAGCTTGATGACGTTATTGATCTTGTGATCCCAAGAGGCAGCAAC
CAGCTTGTTTCCCAGATTAAAAACACTACAAAAATCCCTGTTCTTGGTCATGCTGATGGAATCTGTCATGTATATGTCGACAAGGC
TTGTAATGTGGATATGGCTAAGCGCATAGTTTCTGATGCAAAGTTGGATTATCCAGCAGCTTGTAATGCCATGGAAACTCTTCTTG
TGCATAAGGATCTGGAGCAGAATGCTGTGCTCAATGAGCTTATATTTGCTCTGCAGAGCAATGGAGTCACTTTGTATGGTGGACCA
AAGGCAAGTAAAATACTTAACCTACCAGAAGCACGGTCTTTCAATCATGAGTACTGTTCCAAGGCGTGCACTGTTGAAGTTGTAGA
AGACGTTTATGGTGCTATAGATCACATTCACAGACATGGGAGCGCACACACAGACTGTATTGTGACAGAGGATCCTGAAGTTGCAG
AGCTATTCCTTCGCCAAGTAGACAGTGCTGCTGTGTTCCACAATGCAAGCACAAGATTCTCTGATGGTTTTCGATTTGGACTTGGT
GCTGAGGTTGGGATAAGCACAGGCAGGATCCATGCTCGTGGTCCAGTGGGAGTCGAGGGATTACTTACAACCAGATGGATAATGAG
AGGAAAAGGACAAGTTGTGGATGGAGACAATGGGATTGCTTACACCCATCAAGACATCCCATCCAAGCTTAAAAAGACTTTTGTGT
CAAAGTCTAGGAGAGGATGGGCTTTTTGTTTCCTCTCTGTCTAATATCATATCCTATATTATAATTGTTATTGAAACCCTCTCTTA
TGAAGTGAAGTGGTTTTGATTTTAGAGTTTAGGGATTGCACCAAAAATAAGTTCCTTTGTTCTGTTTGTTTTTACCACTTGGTCTT
TGGCTCATAAGTAAGATATTGTAAGCTACACTTTTCTTATTTATCAATTATTTGTTTGGATTTGCATTGTGAATCAAACCTTGATA
CAAAGTAGAAAATGAACTTAAAGTCATTACCATAAATTCTCAAAGATTCTGTAAATGGGAAAAACACATGTATGCAAATAACGAAC
ATAAACTCATTCATACATTTTGACCTTACCTATTACTCTTCCATAAACGTCTTAACATTCTTCAACCAGAGCAAGTACTCTCTCTT
CACTTTCCTCATCATGTACTGGTGCAAGAAGTTTGTAGTGCTTGCTTTCACTCCTCTAATCTCCAGATACTTGTAGAATGTCTTCT
TCAGATTCTCGTCCAAGTACTCGAAATCAGGCCCTTCGTTCGCTAACTTATCCTCCAAAGTACTCCCCTGATTGCTCACAGATAAA
GCATCAATGGCAATCTCATCCGGGAAAGCCATACAGCTAAACTCTAAGCTGAGCCCGCTCTTCTTGGTAACAGTCACAACTAGTGG
AATACTTGATCCATTGCTATGACCATCATCATCATCATCGTCCTCATCATCATTATCATCACCGTCAAGACTAGGCATACTTACTA
CAACTTTAATATGCTCCCCTTTGTAATCTCTAGTCAATGTTACAGTCTGATGCCCAGGATTGTCTTCAATTTTGAAAGGGAAGCTA
CCTGGAGCCGTCTCTTCATCCAGATCGGGATCATCGATTTGGAGAGCAGTGTTGATCTCGGAGTCAATCACGCGGAGAAGCGATTG
CTCGGAGCTTATCCGATCATAGCCGTCGAGTAAAGGGCAAAGAGCGAACGGAGATGGGTTGCGAGCAGAGATGACTACGTAACACG
GCGGAGATGACCGGACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAK01360 delta 1-pyrroline-5-carboxylate synthetase A [Brassica napus]35620.0
NP_181510 Gamma-glutamyl phosphate reductase [Arabidopsis thaliana]34660.0
AAL87255 putative delta-1-pyrroline 5-carboxylase synthetase P5C1 [Arabidopsis thaliana]34620.0
BAA06864 delta1-pyrroline-5-carboxylate synthetase [Arabidopsis thaliana]34370.0
XP_002881679 delta1-pyrroline-5-carboxylate synthase 1 [Arabidopsis lyrata subsp. lyrata]34150.0

Swiss-Prot top hits (Blast detail)Scoree value
P54887 Delta-1-pyrroline-5-carboxylate synthase A34660.0
P54888 Delta-1-pyrroline-5-carboxylate synthase B32570.0
O04015 Delta-1-pyrroline-5-carboxylate synthase28650.0
Q96480 Delta-1-pyrroline-5-carboxylate synthase28320.0
O65361 Delta-1-pyrroline-5-carboxylate synthase27892e-314

TrEMBL top hits (Blast detail)Scoree value
Q9AXN4 Delta 1-pyrroline-5-carboxylate synthetase A35620.0
Q8RXP0 Putative delta-1-pyrroline 5-carboxylase synthetase P5C134620.0
Q5Q029 Delta-1-pyrroline 5-carboxylase synthetase33490.0
Q9AXN3 Delta 1-pyrroline-5-carboxylate synthetase B32640.0
B9DHM7 AT2G39800 protein (Fragment)32270.0

Arabidopsis top hits (Blast detail)Scoree value
AT2G39800.1 P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1); delta1-pyrroline-5-carboxylate synthetase34660.0
AT3G55610.1 P5CS2 (DELTA 1-PYRROLINE-5-CARBOXYLATE SYNTHASE 2); catalytic/ glutamate 5-kinase/ glutamate-5-semialdehyde dehydrogenase/ oxidoreductase32570.0
AT2G39800.2 P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1); delta1-pyrroline-5-carboxylate synthetase29710.0
AT3G55610.2 P5CS2 (DELTA 1-PYRROLINE-5-CARBOXYLATE SYNTHASE 2); catalytic/ glutamate 5-kinase/ oxidoreductase27950.0
AT2G39795.1 mitochondrial glycoprotein family protein / MAM33 family protein8177e-087

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
194  24%
 
97  41%
 
73  18%
 
82  12%
 
61  6%

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