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Information for unigene UN17464
| FASTA Sequence |
| Unigene ID: UN17464 | Length: 888 |
| SNP | GGATTCTGCGAAGAAGAATATGGCGACAGAGGATGTGAACGAAGCCCTTGCGGCGGCGGAGGTAACGGCGATTGAATCGACGAGAA
GCAGCAGCCTCCTCACAAGCTCGAAAGAAAGTGGAGTTTCTGGTTCGATAACCAATCCAAACCAAAGCAAGGCGCCGCGTGGGGAG
CTTCCCTCCGTAAAGCATGTACCTTCGATACCGTCGAAGATTTCTGGGGTTTGCACGAGACTATATTCGTTCCCAGCAGATTGACA
CCCAATGCTGACATTCACATGTTCAAAGCTGGTGTTGAGCCAAAGTGGGAAGATCCTGAGTGTGCTAACGGCGGCAAGTGGACTTA
TGTTGTTACCAACAACAGGAAGCAAGCTTTAGACAAGGCTTGGCTTGAAACTTTGATGGCTTTAGTTGGAGAGCAGTTTGATGAGT
CAGATGAGATTTGTGGTGTGGTTGCTAGTGTCCGCCAAAAGCAAGACAAGCTCTCCTTGTGGACTAGGACTAAATCTAATGAAGCT
GTTCTGATGGGTATTGGGAAGAAGTGGAAGGAGATACTTGATGTCACCGACAAGATATCTTTCACTAACCATGATGATTCAAGAAG
AAGTCGATTTAGTGTCTGAAGAGAAGACGCAAGTGTGTTAAGACTGATGAAGATGCAATATGGCTATTTTCTTGCATTGTTTGAGC
CGTTTTTCCTTGCAACTCTACAAAGTTCTGTGTTTTACTAAAAGATATTTTTTCTTAATATTAAGTTCAGTCATATAAAATTACTT
TGAATTCATCAATTTTGTGCACCCTTTCATCATATAGTGCTTTGATTGTTAAATGCTAATTTGTTAAGTTACTGGGACATCTCAAA
AATACAATTGTTTTAGTTTTCCTAAAAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ADK94611 translation initiation factor eIF(iso)4E.c [Brassica rapa] | 958 | 2e-101 |
| ADK94609 translation initiation factor eIF(iso)4E.a [Brassica rapa] | 902 | 5e-095 |
| ADK94610 translation initiation factor eIF(iso)4E.b [Brassica rapa] | 893 | 6e-094 |
| BAJ34023 unnamed protein product [Thellungiella halophila] | 848 | 9e-089 |
| NP_198412 translation initiation factor 4E-2 [Arabidopsis thaliana] | 828 | 2e-086 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04663 Eukaryotic translation initiation factor 4E-2 | 828 | 9e-088 |
| P48600 Eukaryotic translation initiation factor 4E-2 | 681 | 1e-070 |
| Q03389 Eukaryotic translation initiation factor 4E-2 | 661 | 2e-068 |
| O81482 Eukaryotic translation initiation factor 4E-2 | 656 | 8e-068 |
| O23252 Eukaryotic translation initiation factor 4E-1 | 515 | 2e-051 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D3UW28 Translation initiation factor eIF(Iso)4E | 712 | 4e-073 |
| Q4PZB3 Eukaryotic initiation factor 4E | 712 | 4e-073 |
| B9SQU9 Eukaryotic translation initiation factor 4e, putative | 708 | 1e-072 |
| B0F832 Eukaryotic initiation factor iso4E | 707 | 1e-072 |
| Q66WU1 Eukaryotic initiation factor iso4E | 705 | 2e-072 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G35620.1 LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1); RNA 7-methylguanosine cap binding / RNA binding / translation initiation factor | 829 | 6e-089 |
| AT5G35620.2 LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1); RNA 7-methylguanosine cap binding / RNA binding / translation initiation factor | 672 | 1e-070 |
| AT4G18040.1 EIF4E (EUKARYOTIC TRANSLATION INITATION FACTOR 4E); RNA binding / RNA cap binding / protein binding / translation initiation factor | 515 | 2e-052 |
| AT1G29590.1 eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putative | 462 | 2e-046 |
| AT1G29550.1 eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putative | 461 | 3e-046 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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