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Information for unigene UN17604

FASTA Sequence
Unigene ID: UN17604Length: 1346 SSR 
GGACCACACCAACCCTCATCGCCTTTTATCCTTCTGTTCTGCTTCAGAGATAGTCACAGTCTCGTCTCTATCGCCTTTTTTTTTAT
TTCACTACACGCCAAAGCTTAAAGACTCTTCTCTCTCTCTCTATGGCTTCCTCTCTCACTGTCGCTGGCACTCAGCCCTCTGCCCC
TTCTTTCTCAGGCCTCCGCCGCACTTGCCCCAAGCTCGACGCCGCCGTCTCCTTCTCCCACCGCGTCAACTCCTCTGTCCGTCTCG
TTTCCTCCTCGCACCGGTCTCCTAGAGGCGTTGTCGCCATGGCCGGGTCCGGAAAGTTTTTCGTCGGAGGAAACTGGAAGTGTAAC
GGGACTAAGGACTCCATCACCAAGCTTGTCTCTGACCTCAACACCGCCACCTTGGAACCAGATGTTGATGTTGTTGTGTCGCCTCC
GTTTGTGTACATCGACCAAGTCAAATCATCCTTGACAGACCGTATTGAAATATCTGGTCAGAACTCTTGGGTTGGGAAAGGTGGAG
CTTTCACTGGTGAAATCAGCGTGGAACAGCTCAAAGACATTGGCTGCAAGTGGGTCATTCTTGGCCATTCCGAAAGGAGGCATGTC
ATCGGAGAAAAGGATGAGTTTATTGGGAAGAAAGCTGCTTACGCGTTGAGCGAGGGTCTTGGAGTGATAGCTTGTATCGTGGAGAA
GCTAGAAGAGAGGGAAGCTGGCAAGACTTTTGATGTTTGCTTCGACCAATTAAAGGCCTTCGCTGATGCGGTGCCTAGCTGGGACA
AGGTAGTGGTTGCATACGAGCCAGTATGGGCGATTGGAACTGGCAAAGTTGCATCTCCCCAGCAAGCACAGGAAGTCCATGTAGCT
GTCCGTGACTGGCTCAAGAAGAATGTCTCTGAAGAGGTTGCTTCCAAAACAAGGATCATATACGGAGGTTCTGTCAATGGAGGCAA
CTGTGCTGAGCTTGCCAAAGAAGAAGACATTGATGGTTTTCTTGTCGGCGGTGCCCCCTTGAAGGGACCTGAGTTTGCGACCATTG
TGAACTCAGTCACGTCAAAGAAAGTTGCTGCTTGATTGACAACTTTCCGCACGTCTCCATGGAACGAATGAGAGGATGAAATAAAA
GGGAGGTTGGCGAGCTTGTTGTTGTTGTGTTCTTAGTTGTTCTTGAACTAATAATGAAAAAAACAAAAATTGATTCATGAGTTCTG
GTTTGAAGGAAGTTTAGTTTCCGGCGAGAAAAAGGGTCTTTGGTTTAAGATCTTTCTTGTCTCTTATAAAGTGATTACACTATTTA
CTTGTGAATTCAAGAGTCCTTTTTCTATATAATCTTTAAAAATAATTCTCAAGACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880361 hypothetical protein ARALYDRAFT_900526 [Arabidopsis lyrata subsp. lyrata]14038e-153
NP_179713 triosephosphate isomerase [Arabidopsis thaliana]13553e-147
NP_001077931 triosephosphate isomerase [Arabidopsis thaliana]13293e-144
P48496 RecName: Full=Triosephosphate isomerase, chloroplastic; Short=TIM; Short=Triose-phosphate isomerase; Flags: Precursor13213e-143
XP_002529248 triosephosphate isomerase, putative [Ricinus communis]13105e-142

Swiss-Prot top hits (Blast detail)Scoree value
Q9SKP6 Triosephosphate isomerase, chloroplastic13551e-148
P48496 Triosephosphate isomerase, chloroplastic13211e-144
Q9M4S8 Triosephosphate isomerase, chloroplastic12977e-142
P46225 Triosephosphate isomerase, chloroplastic11444e-124
P12863 Triosephosphate isomerase, cytosolic8121e-085

TrEMBL top hits (Blast detail)Scoree value
A8MRE8 Triosephosphate isomerase13292e-144
B9STC9 Triosephosphate isomerase13103e-142
D6N3G7 Triosephosphate isomerase12899e-140
C6TK22 Triosephosphate isomerase12701e-137
C6T7V6 Triosephosphate isomerase12639e-137

Arabidopsis top hits (Blast detail)Scoree value
AT2G21170.1 TIM (TRIOSEPHOSPHATE ISOMERASE); catalytic/ triose-phosphate isomerase14104e-156
AT2G21170.2 TIM (TRIOSEPHOSPHATE ISOMERASE); catalytic/ triose-phosphate isomerase13317e-147
AT3G55440.1 TPI (TRIOSEPHOSPHATE ISOMERASE); triose-phosphate isomerase7941e-084

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  33%
 
82  67%

Unigene MembersMember information