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Information for unigene UN18254
| FASTA Sequence |
| Unigene ID: UN18254 | Length: 922 |
| SNP | ATTTGAAACGCAAGAGGTAAATTTGAGATTAACTACTGGAAAGAACAAGTACAAAATGAACTCTAAAGTTACAACACTAGGGAAAC
ACAGAAAACAGATAATGTCTAAATTCTGACAACATAAAGCATCATATTCGCTTGTACACAAGTTTAAGAGGGGATAGTTTCCTCTC
GATCTCTCTCCTTTTTAAAAGGTTACAAAAAGGATAACAAAAGCGGATAAGATAGCAGGTAGCATAAAGGGAAGGGATCATTGCAA
ACACTTGTAATCTGAAGTCGTTTTAGGACGGCATGTAAGTGGACGTATCAATCTGCTCAGGAAGTTCCTTGATATCAACCTCAAAC
CTATCTTGTACCTGGTTGAGAACTTCAGAATCAGAAGCTGATGCCACGAATGTTATTGCAAGACCCTTTGTTCCGAACCTTCCAGC
TCTACCAACCCTGTGAAGATATGTATCAGCAGAATCTGGCATGTCGTAGTTGATGACAATGTTGACACGCTCAATGTCAATTCCTC
TCCCTACCAAGTCTGTCGCCACCAGAATTCTCTTGTGCCCTTCCTTGAAACTTTTGTAGTGGGTCAGCCTCTCTTCCTGAGACATG
CCAGAGTGAATGCATATCGAAGGGAAATTGCATTCAATAAGCAACTTGTTCAGCTCCCCAGCTCTACTAACGCTCTTCACAAAGAT
AACAACTTGATTGAAGTCCAATGCATCGAGAAGGTCATTCAACTTGCGGTTTTTCTCCATCTCGCTCAGTTTGATGTAGTGCTGGA
CAAGACCATGAAGAGTCAATTTGGCTTCATCATCAACATATATCTCCATTGGCTGAAAGGAATAGATATCAGAGTAAAGTGTTATT
AGCAAGCCTTCCTCAGAAAAATCAATACAGAATCGAGGACGGATGAAAGACCCCCAAACTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_001154707 DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana] | 905 | 2e-095 |
| NP_568245 DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana] | 904 | 3e-095 |
| BAD93957 DEAD BOX RNA helicase RH15 - like protein [Arabidopsis thaliana] | 904 | 3e-095 |
| NP_850807 DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana] | 904 | 3e-095 |
| NP_001154706 DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana] | 904 | 3e-095 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LFN6 DEAD-box ATP-dependent RNA helicase 56 | 904 | 1e-096 |
| Q56XG6 DEAD-box ATP-dependent RNA helicase 15 | 898 | 7e-096 |
| Q5JK84 DEAD-box ATP-dependent RNA helicase 15 | 865 | 5e-092 |
| Q0JM17 DEAD-box ATP-dependent RNA helicase 56 | 865 | 5e-092 |
| O13792 ATP-dependent RNA helicase uap56 | 712 | 3e-074 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0Z397 AT5G11200 protein | 897 | 1e-094 |
| B9HA46 Predicted protein | 882 | 8e-093 |
| B9IKW5 Predicted protein | 882 | 8e-093 |
| B9RV50 Dead box ATP-dependent RNA helicase, putative | 882 | 8e-093 |
| A9SV98 Predicted protein | 881 | 1e-092 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G11200.3 DEAD/DEAH box helicase, putative | 906 | 8e-098 |
| AT5G11200.1 DEAD/DEAH box helicase, putative | 905 | 1e-097 |
| AT5G11170.2 ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding | 905 | 1e-097 |
| AT5G11170.1 ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding | 905 | 1e-097 |
| AT5G11200.2 DEAD/DEAH box helicase, putative | 905 | 1e-097 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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