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Information for unigene UN18300

FASTA Sequence
Unigene ID: UN18300Length: 873 SSRSNP
GGACAACAACAACAACAACAATGGCCACTTCAAGAACATTCATGTCCTCTACTCTATTCATTTTCTTCCTTGTCATGGCAACAACC
AATGGTCAGGCTCCAGCTCCAACCCCTTCAGGTCCAACCAACATAACCGCAGTCCTAGAAAAGGCTGGTCAATTCACAATGTTCAT
AAGACTCCTCAAGAGCACCCAAGCCGCAGACCAAATCAACACTCAGCTCAACTCTTCCTCCAGCCAAGGCCTAACCGTGTTTGCCC
CTACCGACAACGCATTTAGCAGCCTCAAATCCGGAACCTTGAACTCGTTATCCGACCAGCAAAAGGTCCAGCTTGTTCAGTTCCAT
GTCCTTCCTACGCTCTTGACCATGCCTCAGTTCCAAACCGTTAGTAACCCCTTACGCACGCAAGCTGGTGATGGCCAAAACGGTAA
ATTCCCTCTTAACATCACTAGCTCCGGTAACCAAGTCAACATCACCACGGGAGTTGTCAGCGCAACGGTAGCTAACTCTGTCTACA
GCGATAAGCAGCTTGCTGTGTATCAAGTGGATCAAGTTTTGCTGCCGTTAGCAATGTTTGGTTCAAGCTCAGCACCTGCTCCTGCG
CCTGAGAAAGGTGGCTTGGTTTCGAAAGGTTCAGCTCCAAGTGGTGATGATGGAGGAGATTCTACTGATTCATCAGATACAGAGAG
AATCAGATATTGGTTCATCTCCACCATGGCAGCCATTGCTGCTTCTTCTATGTGGATATAACACCATATTTGATTTTAAGAATAAC
GAATGAGCTTTAAATTTTGTTGTAATTTGAGTTTTGTGTTATCATGTTATTGTTTTGGTTCAAAAAATTACGATTGAGATTGCACA
ATTTTTTTGATGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM62616 arabinogalactan protein-like [Arabidopsis thaliana]10674e-114
XP_002873077 hypothetical protein ARALYDRAFT_487087 [Arabidopsis lyrata subsp. lyrata]10674e-114
NP_195937 fasciclin-like arabinogalactan protein 11 [Arabidopsis thaliana]10656e-114
XP_002323464 predicted protein [Populus trichocarpa]7215e-074
XP_002326348 predicted protein [Populus trichocarpa]7152e-073

Swiss-Prot top hits (Blast detail)Scoree value
Q8LEJ6 Fasciclin-like arabinogalactan protein 1110653e-115
Q8LEE9 Fasciclin-like arabinogalactan protein 125823e-059
Q9ZWA8 Fasciclin-like arabinogalactan protein 94936e-049
Q9FFH6 Fasciclin-like arabinogalactan protein 134622e-045
Q9SIL7 Fasciclin-like arabinogalactan protein 64443e-043

TrEMBL top hits (Blast detail)Scoree value
A9P8F7 Predicted protein7213e-074
B9MTA8 Predicted protein7152e-073
B9S0M8 Putative uncharacterized protein7115e-073
Q6J191 Fasciclin-like AGP 137115e-073
Q6J193 Fasciclin-like AGP 116945e-071

Arabidopsis top hits (Blast detail)Scoree value
AT5G03170.1 FLA1110662e-116
AT5G60490.1 FLA125823e-060
AT1G03870.1 FLA9 (FASCICLIN-LIKE ARABINOOGALACTAN 9)4935e-050
AT5G44130.1 FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR)4622e-046
AT2G20520.1 FLA6 (FASCICLIN-LIKE ARABINOGALACTAN 6)4443e-044

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
79  36%
 
66  24%
 
117  28%
 
81  4%
 
92  8%

Unigene MembersMember information