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Information for unigene UN18433
| FASTA Sequence |
| Unigene ID: UN18433 | Length: 1115 |
SSR | | ACTCGAAGAAATGACTTCAATAAACCATAATGCATCAGTACATGTTCTTTCCGCATTATTGAGCAAAGGATATTCCCAGGCTTGCT
CGGGATAAAAAGCAAAACCAAAAGATAGTATCTCTCTCGAATCTCTACAGAGAACCAATCCTGTCTTGAAAGGATTTAACACAAGA
AAACAAAAAACAAGCTGAGACAGGGTGAATCAGTAGTGAGTAGTTGGAACCCTGGTGGTAGTTTTCGCCGGTAAGACATTGTCGGG
AAGAATCAGCTCGGGCGGAGTTTCACGGACAATCCCAAGCATCGAATCATAATCCTCATCCTTGCGTGCATATTTCTTCCTAAGCG
CTCTCTCAACCTCGATCTCATCAAATGACTTGAATTCTCTGCGGCATGAATGTGTGCAAGGTTGATGTAGTCTCTGCTGACTTTGA
GATATATGCTATCTCTCATCTGTTAACTTCTCATAAACTTTGCTGGATTCCCTGCCCAAACCTCTCCAGAAGGAATACGGGTGTTC
TCTTTGACAAGAGAACCAGCAGCAACCATGGCATTCTTCTCAACCACCACACCATCAAGTAGTGTAGCTCCCATGCCAACAAATGC
CTCATCCTCAACAGTACACCCATGTATAACAGCACTATGACCTACAGTGACCTTGTCCCCAATCGTAGTAGGTAAAACCTTCCCAC
CAAGATCGGTTTTTGCAACATGTACAAGAGAATTATCTTGGATATTCGTCCCTGATCCGACACTGATGTTATTCACATCACCTCGA
AGAACACAGCCATACCAAATAGAGGAGCCTTTCCCTATTTGAACGTCACCAATAACAGATGCACTTGGAGCCACGAACGCATCCTT
ATCCACCAATGGAGATTTATCAAACACATCCATCAACGTCCGATGCCTCGATAGGTGTTCTTCGAAGCGGTGGCTCCCTTGAAGAA
GAGAGCCGAAACGATCGAGAGCTTTTCCGGAGCCCCGGATCCAGTTACCCACAGTGTAAATAGCTCGTCCTAGGGTTCCCATTTCC
CGATTACCGCACAGAGATAGGACGACGACAAGGGAGAGAGAGAGAGAAATAGATTTTTTTTGCCTAATGACTTCTTCCTTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_175159 gamma carbonic anhydrase 2 [Arabidopsis thaliana] | 971 | 7e-103 |
| AAK28403 transcription factor APFI [Arabidopsis thaliana] | 969 | 1e-102 |
| XP_002302024 predicted protein [Populus trichocarpa] | 883 | 1e-092 |
| ACU23511 unknown [Glycine max] | 874 | 1e-091 |
| XP_002510411 Protein yrdA, putative [Ricinus communis] | 865 | 1e-090 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54JC2 Uncharacterized protein DDB_G0288155 | 447 | 2e-043 |
| Q9FMV1 Uncharacterized protein At5g63510, mitochondrial | 316 | 3e-028 |
| P0A9W9 Protein yrdA | 316 | 3e-028 |
| P0A9X0 Protein yrdA | 316 | 3e-028 |
| Q9SMN1 Uncharacterized protein At3g48680, mitochondrial | 313 | 6e-028 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C6B3 Putative uncharacterized protein At1g47260 | 971 | 5e-103 |
| Q9C5S7 Transcription factor APFI | 969 | 9e-103 |
| A9PFJ3 Predicted protein | 883 | 8e-093 |
| C6TKS1 Putative uncharacterized protein | 874 | 9e-092 |
| B9R7W8 Protein yrdA, putative | 865 | 1e-090 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G47260.1 GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2); carbonate dehydratase | 971 | 3e-105 |
| AT1G19580.1 GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1); carbonate dehydratase | 840 | 4e-090 |
| AT5G66510.1 GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3); carbonate dehydratase | 807 | 3e-086 |
| AT5G66510.2 GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3); carbonate dehydratase | 482 | 1e-048 |
| AT5G63510.1 GAMMA CAL1 (GAMMA CARBONIC ANHYDRASE LIKE 1); carbonate dehydratase | 316 | 3e-029 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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