Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN18567

FASTA Sequence
Unigene ID: UN18567Length: 802 SSR 
GGGATCTCAAAACCAACAAAAACAAAAAAAAAAATTCAAATCCCTAAAAAGATGTCGACGGAGGAAGAACCCAAGGTCGTGGAGTC
GGGAGACGCCGAAGCCGAAGCCACGGTGACGACGACGGAGAAGAAACCTGCTGCTAAAGCTAAAGCTAAGAAGACGAAGGAAGCTA
AGAAGAAGCCTGCTGCTGCTGCTGCACCGAGGAAGAGAACCACTTCGTCTCATCCTCCTTACGAAGAGATGATAAAGGATGCGATC
GTGACGTTGAAGGAGAGGACCGGATCTAGCCAATACGCGATTCAGAAGTTCATCGAGGAGAAGCAGAAGTCGCTTCCTCCTACTTT
CAGGAAGCTTCTCCTCGTCAATCTCAGGAGACTCGTCGCTTCCGGGAAGCTCGTCAAAGTCAAAGCCTCTTTCAAGATTCCGTCTG
CTAAACCGGCTGCGGCGACGAAACCGGTTAAGAAGAAACCGGCTGCTGCTGTTACTAAACCGAAGGGTAAAGCAGCTGCTGCTCCT
GCTAAGGCCAAACCAGCTGCTAAAGGAACCAAGAAACCTGCTGCTTCTGCTGCTAAGCCTAAGGCAAAGACGACAACAACAAAAGC
TGCTGCGAAGCCGAAGCCGAAAGTTACTGCGAAGCCTAAGACGAAGAGTGTAGCTGCGGTTTCGAAGACTAAAGCTGTTGCTGCTA
AGCCTAAGCGAAGAGAGACCTGCTAAAGCTTCGAGGACTTCGAGCAGACGTCTCCAGGGAAGAAGCTGCTCCCGCTAAGAAAGCGG
CTGCGCTGCGCTAAGAAGCTGTGCGAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180620 histone H1.2 [Arabidopsis thaliana]7035e-072
XP_002879272 hypothetical protein ARALYDRAFT_481979 [Arabidopsis lyrata subsp. lyrata]6759e-069
BAH57180 AT2G30620 [Arabidopsis thaliana]5541e-054
NP_172161 histone H1.1 [Arabidopsis thaliana]5494e-054
XP_002892357 expressed protein [Arabidopsis lyrata subsp. lyrata]5404e-053

Swiss-Prot top hits (Blast detail)Scoree value
P26569 Histone H1.27032e-073
P26568 Histone H1.15492e-055
P37218 Histone H15008e-050
Q9M5W4 Histone H14424e-043
P08283 Histone H14424e-043

TrEMBL top hits (Blast detail)Scoree value
C0Z3A1 AT2G30620 protein5547e-055
B9GS56 Histone H15242e-051
B9H8I5 Histone H15053e-049
O22672 Histone H14793e-046
B9S4U0 Histone h1/h5, putative4686e-045

Arabidopsis top hits (Blast detail)Scoree value
AT2G30620.1 histone H1.27032e-074
AT1G06760.1 histone H1, putative5492e-056
AT2G18050.1 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding2589e-023
AT2G18050.2 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding1952e-015
AT1G48620.1 HON5 (High Mobility Group Family A 5); DNA binding1541e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  100%

Unigene MembersMember information