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Information for unigene UN18968

FASTA Sequence
Unigene ID: UN18968Length: 916 SSR 
GGGCTCCTGGAAAGAGATACATAAAATTGGGTGGTTGTTGCCGACGACGCGTCTTTTTGGGTTCTCTCTGTCTTTTGATCTTCAAA
TCTCCTTTCCTCCATCCCACCAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGAGCTCAATCATGGCTACCACCGCTGCAAACA
AGACAATCAACGCCAAATTGGTGTTGCTTGGAGATGTTGGCGCTGGGAAATCGAGCCTTGTGTTACGCTTTGTTAAAGATCAGTTT
GTTGAGTTTCAGGAATCAACCATCGGTGCAGCTTTTTTCTCACAAACACTAGCTGTCAACGATGCCACTGTCAAGTTTGAGATATG
GGATACAGCAGGTCAGGAACGGTACCATAGTTTGGCTCCTATGTACTACAGGGGTGCTGCTGCTGCTATCATTGTCTTTGACGTTA
CAAACCAAGCCTCGTTTGAGAGGGCAAAGAAATGGGTTCAGGAACTTCAGGCACAAGGTAACGCTAATATGGTGATGGCCCTTGCT
GGAAACAAATTTGATTTATTAGATGCAAGGAAAGTTTCCGCAGAGGAGGCACAAACATATGCTCAGGAGAACGGTCTTTTCTTCAT
GGAAACTTCAGCAAAAACCGCAGCTAATGTCAAGGAGATATTTTATGAAATTGCAAGAAGGTTACCGAGAGTACAACCAACAGAAA
ACCCAACAGGAATGGTTTTACCAGATAGGGCCATGGATAGGGCAGTGAGTTCATCTTGTTGTGGTTAGTTATATGTAATGGAATAC
ACTTCCCTTAAAAAGGGGACCTTTTGGTCAGTCAACATTGAGTTATGGACTTCTGTGTTTTGCATATCTTTGCTTTGTTTTGCTTG
TGTGGACATTTATTTTACCAATTAAAAAGGGTTGTAAATGAAGATATTTCATATGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867930 hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp. lyrata]9635e-102
NP_193699 Ras-related small GTP-binding family protein [Arabidopsis thaliana]9554e-101
NP_199326 Ras-related protein RHA1 [Arabidopsis thaliana]8928e-094
CAA50609 ras-related GTP-binding protein [Nicotiana tabacum]8622e-090
ABK92976 unknown [Populus trichocarpa]8604e-090

Swiss-Prot top hits (Blast detail)Scoree value
P31582 Ras-related protein RHA18923e-095
P31583 Ras-related protein RHN17893e-083
P29687 Ras-related protein Rab57705e-081
Q86JP3 Ras-related protein Rab-5A6083e-062
P51148 Ras-related protein Rab-5C6065e-062

TrEMBL top hits (Blast detail)Scoree value
Q9SN68 AT4g19640/F24J7_1909553e-101
Q40570 Ras-related GTP-binding protein8622e-090
A9P9C3 Putative uncharacterized protein8603e-090
B9NA46 Predicted protein8594e-090
B9ICG5 Predicted protein8504e-089

Arabidopsis top hits (Blast detail)Scoree value
AT4G19640.1 ARA7; GTP binding9561e-103
AT5G45130.1 RHA1 (RAB HOMOLOG 1); GTP binding8932e-096
AT3G54840.1 ARA6; GTP binding / GTPase5285e-054
AT1G09630.1 ATRAB11C (ARABIDOPSIS RAB GTPASE 11C); GTP binding3995e-039
AT5G10260.1 AtRABH1e (Arabidopsis Rab GTPase homolog H1e); GTP binding3978e-039

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  50%
 
111  25%
 
81  25%

Unigene MembersMember information