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Information for unigene UN19540

FASTA Sequence
Unigene ID: UN19540Length: 886  SNP
GATTGATGGGAAAATTCAAAGGCGCATAGAAGGGAAGAATATGAGAGAAATATGGAAGCTTTGACCGCCATTGATTCTCTACACTA
ACCTCATCTCTTCTTCATCTCATTTCCCAATTCTCTCTTCTCTCTCTCTTCTCTCTGATGCGTGTTCTTCTCTTTCCTTTAAGATT
CTTTGGCTCAGATCAGTCACAGAGCCAAATAGAAGAATAAAGAAGGTCCTGCTGGGATTTTCTTACATTGACAAACTGCCAAGTCG
ACACTCAAACTTTTTTGCAACAGAGATGGCAGAAGTTGATAATCAACTAGAGATCAAGTTTAGGTTAACTGATGGTTCTGATATCG
GCCCTAAAGCATTTCCTGATGCTACAACTGTTGCTGCATTGAAGGAAACTGTTATTTCTCAATGGCCTAGAGAAAAGGAAAATGGG
CCGAAGACAGTGAAAGAGGTGAAGTTGATAAGCGCAGGGAAAGTTTTGGACAACAACAAGACTGTTAAAGACTACCGAAGCCCCGT
CTCTAATCTCGTTGGCGCTGTCACCACAATGCACGTTATCATCCAACCTCTGATTACTGAAAAAGAAAAGAAGCCTAAAGGTGATG
ATCCAAAGATGAACAAATGTGTCTGCTCAGTCATGTAAGACAAACGCAAAATCTCAACAGAGGCAGGTTACTGCTCTGTTCCCTCA
TGTGGTTTGGTATAGATTGTTTACTGATGCATAACCATAAGTGTTGAACCTTTTTTTTTAAAGTATAAATCAAATCTCTATTTACT
AAGCTTGTTGCAAAGATCACAGATAGAGTGAATCATTGATGTAGTAGTGATTCAGAACTTGTTGAAACACAACACACAAAGAGACT
CTGCTTTTACCTCTGTTTTCAGAACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_186754 membrane-anchored ubiquitin-fold protein 1 [Arabidopsis thaliana]5423e-053
1SE9 Chain A, Structure Of At3g01050, A Ubiquitin-Fold Protein From Arabidopsis Thaliana5371e-052
XP_002884296 membrane-anchored ubiquitin-fold protein 1 precursor [Arabidopsis lyrata subsp. lyrata]5315e-052
NP_568315 membrane-anchored ubiquitin-fold protein 2 [Arabidopsis thaliana]4572e-043
XP_002873725 membrane-anchored ubiquitin-fold protein 2 [Arabidopsis lyrata subsp. lyrata]4482e-042

Swiss-Prot top hits (Blast detail)Scoree value
Q9MAB9 Membrane-anchored ubiquitin-fold protein 15473e-055
Q8LCS8 Membrane-anchored ubiquitin-fold protein 24579e-045
Q8GWJ6 Membrane-anchored ubiquitin-fold protein 63261e-029
Q75GT2 Membrane-anchored ubiquitin-fold protein 13199e-029
Q9SH14 Membrane-anchored ubiquitin-fold protein 53144e-028

TrEMBL top hits (Blast detail)Scoree value
B9IK46 Predicted protein3943e-036
A9PJS8 Putative uncharacterized protein3881e-035
B9H0E3 Predicted protein3881e-035
B9SJA9 Putative uncharacterized protein3801e-034
C6SXL4 Putative uncharacterized protein3665e-033

Arabidopsis top hits (Blast detail)Scoree value
AT3G01050.1 MUB1 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 PRECURSOR)5482e-056
AT5G15460.1 MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2)4578e-046
AT5G15460.2 MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2)4578e-046
AT1G22050.1 MUB6 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 6 PRECURSOR)3271e-030
AT1G77870.1 MUB5 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 5 PRECURSOR)3152e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  33%
 
122  17%
 
102  17%
 
114  33%

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