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Information for unigene UN19577
| FASTA Sequence |
| Unigene ID: UN19577 | Length: 1261 |
| SNP | GGGTGTACATAGATGAGTGAATATACAAATAACAGATTAAGAAGCTTGCCGGTATCGTAGCCAAAGAGAAGACCACCGATTCCAGC
GGAGAAAGCAAGACGAAGAACATAAGGGTTCTTCCATGTTAGAGAAAAACACTCTCTGAAAGCTGATTTATCTGCTCCTCCATAAG
CGACAAAATACTACCGTGACCAAAACTGAATGAAAACATTGGAAAAAATACATTTGAGTATCTTGAAAGGCCTCACCGAGAGGTAT
TAATTGGCAAAGGCCTCACTGAGAGGTATTAATTGGGCCAAATAATAAGTCCAATACAAGAAAACCTAGAGGCGTTATATAAATTC
CAGCATCCCTCGTCAGCCCTCAGGCCTCTTCTTCCTCTTCAAGTCCGCCGTTGCAACTCAGTGATAAAGGCTCGAGCTTTAGAAGA
CAATGGCTGCTTCTTTCCCCAACCTTAACTCTGATTCTGGATTGAAGAAGCTCGACGAGCATCTCCTCACTCGCAGTTACATCACT
GGGTACCAGGCTTCAAAGGATGACATCACTGTCTTTACAGCTCTTGCAAAGCCTCCAACTTCACAGTATGTCAACGCATATCGTTG
GTACAGCCACATCGATGCCCTTTTGAGGATCTCTGGTGTCTCTGCTGAAGGAAGCGGTGTCATTGTTGAGGGATCAGCCCCCGTCT
CAGAGGAGGCTGTTGCTACTCCACCAGCAGCTGATTCTAAGGATGCGGCTGATGAGGAAGATGATGATGATGTTGATCTTTTCGGT
GAGGAGACCGAAGAGGAGAAGAAAGCTGCTGAAGAGAGAGCTGCTTCCGTGAAGGCATCTACTAAGAAGAAGGAATCTGGAAAGTC
ATCAGTCTTGATTGATATCAAGCCATGGGATGATGAGACTGACATGAAGAAGCTAGAGGAAGCTGTGAGATCCGTCCAGATGGAAG
GATTATTCTGGGGAGCGTCAAAGCTTGTACCGGTTGGTTACGGTATCAAGAAGTTGCAGATCATGTGCACCATTGTTGACGACCTC
GTCTCTGTTGACACCATGATTGAAGAGACGCTCACCGTCGAGCCAATCAATGAGTTTGTCCAGAGCTGTGACATTGTTGCCTTCAA
CAAAATCTGAGGATGGAGAAAAGAGCTCAAGGATGTCCTTTGTGTGTTTTTATTTTTTGAGTTTCCTGTGTTTTCTACTGTTGTTT
TGATTCTGATATTTGAATAATTTTGATGCTTATTCAATACAGTCTTTTCTTTATTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABK78691 putative elongation factor 1-beta [Brassica rapa] | 1121 | 4e-120 |
| XP_002890860 elongation factor 1-beta [Arabidopsis lyrata subsp. lyrata] | 1118 | 8e-120 |
| NP_001077627 elongation factor 1-delta 1 [Arabidopsis thaliana] | 1114 | 2e-119 |
| NP_174314 elongation factor 1-delta 1 [Arabidopsis thaliana] | 1101 | 7e-118 |
| E86426 probable elongation factor 1-beta [imported] - Arabidopsis thaliana | 1101 | 7e-118 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P48006 Elongation factor 1-delta 1 | 1101 | 3e-119 |
| Q9SI20 Elongation factor 1-delta 2 | 1075 | 3e-116 |
| P93447 Elongation factor 1-delta | 885 | 4e-094 |
| O81918 Elongation factor 1-delta | 878 | 2e-093 |
| Q40682 Elongation factor 1-delta 2 | 857 | 6e-091 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A0T2P4 Putative elongation factor 1-beta | 1121 | 2e-120 |
| A8MRC4 Uncharacterized protein At1g30230.2 | 1114 | 2e-119 |
| B3LF87 At1g30230 | 1101 | 5e-118 |
| Q39124 EEF-1beta protein | 1046 | 1e-111 |
| C0LJH8 Seed ripening regulated protein | 968 | 1e-102 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G30230.2 elongation factor 1-beta / EF-1-beta | 1114 | 9e-122 |
| AT1G30230.1 elongation factor 1-beta / EF-1-beta | 1102 | 2e-120 |
| AT2G18110.1 elongation factor 1-beta, putative / EF-1-beta, putative | 1076 | 2e-117 |
| AT5G19510.1 elongation factor 1B alpha-subunit 2 (eEF1Balpha2) | 645 | 2e-067 |
| AT5G12110.1 elongation factor 1B alpha-subunit 1 (eEF1Balpha1) | 642 | 5e-067 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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