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Information for unigene UN19662
FASTA Sequence |
Unigene ID: UN19662 | Length: 688 |
SSR | SNP | CTCTCAATATTCACTTTATAGATTCAAATGAGTGTGAGAACTTTGATGAATAAAGAGAGAGAGAGAGATACACTGTTGAGTTTATA
CAAAGAATGGATTTAAAAAAGACAACAAAACATGATCACCATTTCCAGAAAACATTGGAACCACACTTGTACTTGTCTTTGCCTTC
GCATTCCAACGCCAAATCTTCTGAGATGAATGGTACTTTCTTTTGCTTGGCAAGATCTTGGCAACCAGTGAAATTCTCAGGGAACT
TGCAGCTTCCGAACTGGACAGTAAATGCTCTCGCAAAGTTTGCTCCACTTGTTGCCAATCTCTTCTTATCATTCAGTTCTTTGTTG
GCTTTGCTCTTCTCAAGATACTCATCGATGACACCAGCATTAGCAGAAGCAGAGGAGAAGAGTGTAGCAGCTAAGATTACCATGGC
TGATCTTCTTCCATTAACATCATCACCACCATCTCGTTGTTGAGCTTTGATCACAGGAAGCGTTTGTTTCTTTTGACCAAACCCAA
CTGATGAATTCACTAAACCCACTCTCTGGTTCAGCTCTGCCGAGCTACCACCAGAGATTGCGTAGCTGCATGTGAGAACACTCGAG
TTCATGGCCGCCATTTTGTTTCTCTTTTGCTTTGTTCAGAAAATTCAAGAGTAGTAACTAGTAAGGTCTTGTGATTGGTTGGGTCC
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GenBank top hits (Blast detail) | Score | e value |
BAJ33864 unnamed protein product [Thellungiella halophila] | 754 | 5e-078 |
XP_002866588 photosystem I reaction center subunit psi-N [Arabidopsis lyrata subsp. lyrata] | 727 | 6e-075 |
NP_201209 photosystem I reaction center subunit N [Arabidopsis thaliana] | 725 | 1e-074 |
XP_002526638 Photosystem I reaction center subunit N, chloroplast precursor, putative [Ricinus communis] | 604 | 1e-060 |
ACU14018 unknown [Glycine max] | 597 | 7e-060 |
Swiss-Prot top hits (Blast detail) | Score | e value |
P49107 Photosystem I reaction center subunit N, chloroplastic | 725 | 5e-076 |
P31093 Photosystem I reaction center subunit N, chloroplastic | 445 | 1e-043 |
O65107 Photosystem I reaction center subunit N, chloroplastic (Fragment) | 426 | 2e-041 |
Q9SBN5 Photosystem I reaction center subunit N, chloroplastic | 273 | 1e-023 |
TrEMBL top hits (Blast detail) | Score | e value |
B9SKW9 Photosystem I reaction center subunit N, chloroplast, putative | 604 | 8e-061 |
C6SXP5 Putative uncharacterized protein | 597 | 5e-060 |
C6SVX7 Putative uncharacterized protein | 595 | 9e-060 |
D2K7Z2 Photosystem I reaction center subunit | 564 | 3e-056 |
D5L5T1 Putative photosystem I reaction center subunit | 543 | 9e-054 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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