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Information for unigene UN19726
| FASTA Sequence |
| Unigene ID: UN19726 | Length: 1206 |
SSR | SNP | TTTTTGTCTCATCTCCTTCACCTTCTCCTCCTATCTCTCTCTCTCTCCCTCAAATCTTTTCAGGCATAACTAAATCGAATCATAAG
CACTTCAAAGTATAACTAAAACTTCCTGATCTATTAACTGACAATAGATTCTTGGGCTCTTCTTTATTTCGACAGATTCTAATCCG
TTATAGTTGTTTCAAACGACACGGTGAAACCTTTGTTTTTATATAATATCAGACTCCTACTTCTTCATCTGTGAAACTTTTAAGCT
AAAAATGGGTGTTGAAAAAATGGTGTGTTTGGTTTCTCGCACTGGTCGTCAGTTTCAGAGATACAACAAAGGTCGTCGCCAAGTCG
TCGGATGTATTCCGTACAGATTCAAGTTATCAAGCGATGGTAAAATTAGTGACGAGGTAGAAGTTCTTGTTATCTCTTCTCAAAAA
GGTCACGCCATGATGTTTCCTAAGGGTGGTTGGGAGCTTGATGAATCTGTAGAAGAAGCTGCATCAAGAGAGTCTCTTGAAGAAGC
TGGAGTTCTTGGCAACGTAGAGCATCAGTTAGGAAAATGGGACTTTTTGAGCAAAAGCAGAGGAACATACTATGAAGGACTGATGT
TCCCTTTGCTTGTAACAGAACAACTTGAGCTTTGGCCTGAGCAACATGCTAGGCAAAGAATCTGGATGAACGTAGTTGACGCCAGA
GAAGCCTGTAGAGATTGGTGGATGAAAGAAGCATTAGATGTTTTGGTTGCGAGACTCTCGTCACCAATGATTCAACCAAAGGAAGA
GAAGACTCTTTCCATCTCTATTGAAACAATGTGCTGATGACTGCTGATTGTGATGGGAGTTTTTGGACTAGTGGGTCTCTGTACAT
ACAAATAGATGGGTTTCAGTTAGTATTGAGACTGCTGAAGATCAAAACAAATGCAGAGCCGGAAAACAAAAATTATGAGTAGATTT
TTAGGTTTAATTTGGAGCAAAAAATTATCATGTGATTTAACAAGTCTTGTATGTCGTGTTTATAATGTTTCTGCAAGATTTGATTA
AAGGGACGATGAAGTGTTACGAACCTAAACAAAGAAAGCAAGCAAAAACTGTACAACTGTGTTTCCCTCAGTTTATGTTTTTCATC
TCTCTTTGAATTTGCAATGGGAACACTTGATTCATGATGATTTTTGTGTTTGAGAAATATTTAATAATGCAAGTGGTGATACGTGT
CG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876770 hypothetical protein ARALYDRAFT_904375 [Arabidopsis lyrata subsp. lyrata] | 912 | 6e-096 |
| NP_565273 nudix hydrolase 17 [Arabidopsis thaliana] | 911 | 7e-096 |
| AAM66124 unknown [Arabidopsis thaliana] | 886 | 6e-093 |
| XP_002890077 hypothetical protein ARALYDRAFT_471677 [Arabidopsis lyrata subsp. lyrata] | 757 | 5e-078 |
| NP_172939 nudix hydrolase 18 [Arabidopsis thaliana] | 749 | 5e-077 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZU95 Nudix hydrolase 17, mitochondrial | 911 | 3e-097 |
| Q9LQU5 Nudix hydrolase 18, mitochondrial | 749 | 2e-078 |
| Q9LE73 Nudix hydrolase 4 | 470 | 4e-046 |
| Q8VY81 Nudix hydrolase 21, chloroplastic | 458 | 1e-044 |
| Q93ZY7 Nudix hydrolase 12, mitochondrial | 346 | 1e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SJ22 Diphosphoinositol polyphosphate phosphohydrolase, putative | 660 | 7e-067 |
| B9HW22 Predicted protein | 649 | 1e-065 |
| B9HJF7 Predicted protein (Fragment) | 628 | 3e-063 |
| C6T3J9 Putative uncharacterized protein | 600 | 6e-060 |
| A5B3U5 Putative uncharacterized protein | 592 | 5e-059 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G01670.1 atnudt17 (Arabidopsis thaliana Nudix hydrolase homolog 17); hydrolase | 912 | 2e-098 |
| AT1G14860.1 atnudt18 (Arabidopsis thaliana Nudix hydrolase homolog 18); hydrolase | 749 | 2e-079 |
| AT1G18300.1 atnudt4 (Arabidopsis thaliana Nudix hydrolase homolog 4); hydrolase | 470 | 4e-047 |
| AT1G73540.1 atnudt21 (Arabidopsis thaliana Nudix hydrolase homolog 21); hydrolase | 458 | 1e-045 |
| AT1G12880.1 atnudt12 (Arabidopsis thaliana Nudix hydrolase homolog 12); hydrolase | 346 | 9e-033 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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