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Information for unigene UN19859
| FASTA Sequence |
| Unigene ID: UN19859 | Length: 1908 |
SSR | | GGTCATCCAATAGATTGGGTGAGCACACATAGGTTCCATCACCAGTTCACAGATTCGGACCGTGACCCACATAGCCCTATGGAAGG
ATTCTGGTTCAGTCATGTCTTCTGGATATTCGACGCCAGTTACATGAGAGAAAAGTGTGGAGGACGTGACAACGTGATGGACTTGA
AACAGCAATGGTTCTATAGGTTTCTACGAAAGACAATTGGTTACCACATCATGACGTTTTGGACCCTCGTCTACTTGTGGGGTGGT
CTTCCTTACCTAACTTGCGGCGTGGGTGTTGGAGGAGCAATCAGTTACAACGGGACTTGGCTCATAAACTCAGCTTGCCATATTTG
GGGATCACGAGCCTAGAACACCAAGGACACATCTCGTAACATTTGGTGGCTAGGACCATTTACGATGGGGGAAAGCTGGCACAACA
ACCACCATGCCTTTGAGGCATCGGCTAGGCATGGTCTGGAATGGTATCAGGTGGACCTAACTTGGTACCTCATCTCGTTCTTCCAG
GCTCTCGGTTTAGCCACTGACGTCAAATTGCCATCAGAAGCTCAGAAACGCAAGTTGGCTTTTGCTCGTTAATCTCAGCTCTGATT
CTATCTATTTCGCTTTCAACTTTGCGTCTCTTAATGATATGTACTCATCACTTGTTCTTTTGCTATTTATGTGAAACTGTTGATAA
CCATCAGTTGTCATGAATATGTAAAGCTGGTCTGCTTCAAACACCTAAACTTTAAGTACATTGCACGCTATAGGGACAATGAAAAC
ATTATTAAGCCAAACTATTCATGATCTGTAGTTCTGTACGTCGGTAAAATTATCTAATTGCTTAAGCTTTAAAATTGTCCTTTGCT
CTTCTAATAACACCCAGAGCTTCCGCTTCATCAGCAGTCTCTGGAATACCTAGAACCCGGCGAATATACATATTCCCAGTACGGAG
AAACGGGTTACACGCTTTCTCCATCTTCATCGTTGTTGGAATCGTAGGTAACTTCTTGTCACGGAGTTCTGCAACGTAGGCTGCGT
AAGACTGGAGTACCTCGTTAGCTGGTTCTACAGATAACGCAAACTTGGAGTTACTCAGTGTGTATTCATGGCCACAATATATGCTT
GTGTCATCTGGCAAAGCAACTATCCTCTGTAGCGAAGCTAGCATCTGCTCTGGAGTACCTTCGAAGAGCTTACCACATGATAAGCT
AAATAAGGTGTCCCCACTGAAAACTGCTCGTGCCCCTGGGAAGTAGAAACTAATATGGCCTATTGTGTGGCCAGGAGTTTCCATAA
CATTAACTTCATGGCCAGCAAACCCCCACTTGTCACCATCTTTCAGAGCTATATCAATTCCAGGAATCCGTTCCCTATCTACAGCT
GAGCCAACCACCTTTGCACCGTACTTGTCTTTTAATTCCAAGTTCCCACCAGTGTGATCATAATGGTGATGTGTATTCAATATATA
CGTTAGGTTTCGACCATTCTTCTTTAAGGCATTCATAACAGGTGCAGCTTCGGAAGGGTCAACCACACCAACCGTACCAGTATCCT
CGTCGTGTAATATATAAGCGTAGTTGTTCGCAAGACATGGCACCAGTTCAATTTGAAGTGAGGAAGAGATATTGGGGACACTGCAG
AATCTTGACACGTGAACAGATCTTCCAGGAGCATCGCACAAAGTCTTGAGAGGAGAAGAGAACAACTTCACCATCACACCAGAGAC
AAAACCTTTTCTGAGGCTAAGCTGGCTCACGCATGGTTGACTTGTTAGCTTCCTAGAACAGCGAAAGAAGGAGGCTGCAGAAGAAA
CTTTCGAGATAGCTTGCATCTCTCTCTCTCTCACTCTCTCACAGAACTCTTTCTTTGCTTGATGCAGTGTAGAGAAAGAGAGCGTC
GGCGCGGTTTCTCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_563760 putative hydroxyacylglutathione hydrolase 2, chloroplast [Arabidopsis thaliana] | 1491 | 8e-163 |
| NP_849599 putative hydroxyacylglutathione hydrolase 2, chloroplast [Arabidopsis thaliana] | 1475 | 6e-161 |
| AAF80136 Contains similarity to glyoxalase II isozyme from Arabidopsis thaliana gb|U90927 and is a member of the Metallo-beta-lactamase seperfamily PF|00753. ESTs gb|AV519053, gb|AV535897, gb|AV535667, gb|AV556046, gb|BE039169, gb|AV525509 come from this gene | 1405 | 7e-153 |
| XP_002892321 hypothetical protein ARALYDRAFT_311691 [Arabidopsis lyrata subsp. lyrata] | 1390 | 4e-151 |
| XP_002879322 glyoxalase 2-5 [Arabidopsis lyrata subsp. lyrata] | 1375 | 2e-149 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LDW8 Probable hydroxyacylglutathione hydrolase 2, chloroplast | 1491 | 3e-164 |
| Q9SID3 Hydroxyacylglutathione hydrolase 2, mitochondrial | 1354 | 2e-148 |
| O24495 Hydroxyacylglutathione hydrolase 1, mitochondrial | 1068 | 4e-115 |
| Q9LND9 Delta-9 desaturase-like 1 protein | 1064 | 1e-114 |
| Q9FPD5 Delta-9 desaturase-like 3 protein | 1013 | 9e-109 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9MY67 Predicted protein | 1201 | 2e-129 |
| A9PDC1 Putative uncharacterized protein | 1195 | 1e-128 |
| A9PAT7 Predicted protein | 1193 | 2e-128 |
| C6TKG9 Putative uncharacterized protein | 1185 | 2e-127 |
| C6T9Q5 Putative uncharacterized protein | 1150 | 2e-123 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G06130.1 GLX2-4 (glyoxalase 2-4); hydrolase/ hydroxyacylglutathione hydrolase/ zinc ion binding | 1492 | 2e-165 |
| AT1G06130.2 GLX2-4 (glyoxalase 2-4); hydrolase/ hydroxyacylglutathione hydrolase/ zinc ion binding | 1476 | 2e-163 |
| AT2G31350.1 GLX2-5 (GLYOXALASE 2-5); hydroxyacylglutathione hydrolase/ iron ion binding / zinc ion binding | 1364 | 1e-150 |
| AT2G31350.2 GLX2-5 (GLYOXALASE 2-5); hydroxyacylglutathione hydrolase/ iron ion binding / zinc ion binding | 1347 | 1e-148 |
| AT2G43430.1 GLX2-1 (GLYOXALASE 2-1); hydroxyacylglutathione hydrolase | 1068 | 3e-116 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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