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Information for unigene UN19870
FASTA Sequence |
Unigene ID: UN19870 | Length: 1761 |
SSR | | GAGTTATGAAAAGAATATACTTTATTTATTCGAATACAAGTAACAAATTTGCATTTTACATGAGAATAAGAATGGAAGAGAAAACA
GAGCAACTTCAGCACACACATGTGCTGAAGAAAATTACTCCTTTTGCGTATTCTCAACAATCAAGAATCAATCACCACTTTTTCTT
TTTCTATAGCTAAACCCTACAAATATATCACTGTAATATGACAAATGAGTCATTTATAAGTATTTTTTTCTTTTTTATAATGAATA
GTAAATCTATATGTATTTCTTAAATTGGAGGAGCATCTTGAGGAGTGAAAACCCTGTGGTGGCAAGTAGGGTTACAGGGATAAGGA
CAATCTATCTTCTGAAACAATTTTCTGTCATAAACCCAATCTCCAACAGCTTTTGCTATTGTCGTTCGGTTTAGAATTGGAGAATC
TTGCCAGAACCATGAAGTTTGTGTCTCGGTTTGGCAGTGAGTGTAACAAGAGTCTATGAACATCCCTCTTGATGAAGATCTACCTA
GACCTATCACCGCAACTCAAGAACTCTAACCTGAAATCTTGCATAACTTTCAGCTGGTTTGGTTGGCAATTCTTGATGTCAAGTTG
ACAACTTTGCCATTTTCCATAAGGATCAGCAGCACGGGGAGCCAAAATGTTCTTTATCTGCCAAGAGTCGTATGCGGCATTAAGAA
TGAATACAGGAGTTCTAATCTGGCGAGCTACGTATTGCGGGAAGAAGCACATTGCAGGGGTCAATCTTGATGTGCATGACCTCGGC
AAGTTCTTTGCTGATCCATGCAGAGTAACCACATCTTTGAAGTATGATTTAATGTATTGGGCTCCTGAGACATCTCTTGTATTGAG
AAAGAAACCAGCATCTGAAAGACATTTTACTTTGGTACCCATCGGTAACAGAGCACGGAAACTGTCACAATGCATCAGGGAAGCTA
ACCCGCCAGCAGAACACCCAGACAAAACAGCGTTCTCGGCGTTTCTCATGCCTTTAGCTAGCAACTCCTGCATAACGGCTAGCCAA
ACTCGAGCACCTCTGAAGTGAAGATTAGTAGCAGGGTTCACTGCTTGCACATCTCCTGTGAATGATGACCCGTCACAGTATCTAAC
TTTCACTCTGTTCCAATTGTAAAAATCAGGATTATATTGTTTCTTATTGCTAAGAATAGCTGAGAAGGCAAGATTCTCCACCATTT
TCTTGGATGAACCTAATCGAGTATGCATCCGACTAAGGCAGTTTGTTACATTATTACACCATCCTCCTCCCTCAAGCTGTATCAAC
CAGCTGTTGATTCCAGTTCCAGAACCTCTGTGTAAATGATAAGCTGGTGGACTGCCATCCAAACAAACGGCCCCTCTTGCGACGGC
GTTTCTAACAAATGTAATATTGACAAACAATCCTTCTGCTTTAAAGATTGCTAACAAACATACCACAAGAACCAACCATTGCTTGA
AGTTGAACATTTTGGAAACGCGGTTTCTCACAAAACCCAACTTGGGATTAGTCTGAACCTCCAAGTTTCGGTTTGTTAACTCGGAG
GATGACTCAGTTTCTGCACATTGCCCGAAGACGCGAGTTCGGAGCAATGGCGGGAGCAGAAAGATTCACGGAAGTAGTAAAGCGTT
TATGCAAAGCGCGTTTTGGATCCGACGTACAATGTTTTTTTTCTCTGTGTGTGTGTGTTTTCCGGAACCCGAGAGCCGACACTGAT
TCGTTCGTTTTTTTGCTAAAAGAAAGTTTAATAAAACATCC
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GenBank top hits (Blast detail) | Score | e value |
NP_193677 putative Pectinacetylesterase [Arabidopsis thaliana] | 1575 | 1e-172 |
XP_002867938 pectinacetylesterase family protein [Arabidopsis lyrata subsp. lyrata] | 1528 | 4e-167 |
NP_974575 putative Pectinacetylesterase [Arabidopsis thaliana] | 1436 | 2e-156 |
XP_002519911 pectin acetylesterase, putative [Ricinus communis] | 1347 | 3e-146 |
XP_002328835 predicted protein [Populus trichocarpa] | 1281 | 2e-138 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q8R116 Protein notum homolog | 238 | 6e-019 |
Q6P988 Protein notum homolog | 229 | 6e-018 |
TrEMBL top hits (Blast detail) | Score | e value |
Q6DBP4 At4g19420 | 1575 | 9e-173 |
Q3E9Z0 Putative uncharacterized protein At4g19420.2 | 1436 | 1e-156 |
B9S1P6 Pectin acetylesterase, putative | 1347 | 2e-146 |
B9N0N4 Predicted protein | 1281 | 1e-138 |
B3V945 PAE | 1277 | 3e-138 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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