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Information for unigene UN19948
| FASTA Sequence |
| Unigene ID: UN19948 | Length: 1314 |
SSR | SNP | GCATTAAGAAGTAAATATAATAAACATGAAGCATTTAAGCCTTTGTAGTTTATACAGAACAAAATCTATCAAAGGATTTGGCTAAA
GATCTGAATAAACAGATTCATAACCGAGCAAAATATTTTGAAACAAAGGTTTCACATAACCAGAGACGATAACTAAACATCTGGTT
TATTTTTCTAAATCAAAGGAAACGCCAATGGCTAAGGATAATACATCAGGGAATAAGTTATTCAAGGCTCGATCTTGATGCCGTTT
TGGCTTGATTCTTGTGATGTCGAAGGAGGAGGAGGAGGAGGAAGATGACCTTTCTCTTGCAAGCTCTTGACAGTGTCGTAAAGGCT
TTGCTTGGTGGACGTGAACTCTAAGCCTAAGTCCTTTATCTTTTGGTTAGTGAACTTGTACGGCTTGGCTCTTGGGTTCTTCTCGT
CCTTGCACTTGGTTGGAAGTGGGTACTCCGGGAATAACTTAGCCAAAATCTCAACAACTTCGCCGCGGTGAAGTGCGCTCTCCGCA
AGGAGATAACGTCCAGAGGCCGAGGGTGCCTCGTAGACAAGAACATGAGCTAGTGCGACATCACGAACATCCACATAAGCCTGAGT
CAAATTAGCGTAAGTCTTAGCCGAGCCGGTTAGATACTTTAGTACGTGGAAGAGACTGGCGTTGATCGTCGGCTGTAACGGCGGAC
CAAGAACCAGCACCGGATTCAAAACCACCAGGTCAACACCTTTCTCCTCTGCCGTCTCCCACGCCGCTTGCTCCGCCACCATCTTG
CCGTAACAATACCAATTCTTAGTGTTTTTGCAGAACTCAAGATCACTCCAACAACTTTCGTCAACAACGGCTTCAGGGTCACGGTT
CGGGTCCATGTAGACCGCACCAATTGAGGAGGTGATGACCACGCGCTTCACCTTGGTTTCAGCTGCAGCATTAATTACGAACTTGG
CTCCGTTCACGGCCGGCTCCACCATTTCTTCGGGATCGTCAGTGACCGGAGAAGCCGTGTGAAAGACGCCATCGCAACCATCGATA
GCCTCCTTAAGAGCATCATAGTCCTGGAGATCTGCTTTGCACAGAATCAGTCTCTCCTTGGCCCCTTCTAGTTCTCTCAAATGTGT
GTTCTTCGGATCATCTGGATTCCGTACGGTTCCTTTGACCGTGTAGCCTCTCTCAAGGAGTAACTTAATAATCCAAGAAGCGATGT
ATCCACCAGCACCAGTGACGCAGACTGTTTTCCCGGGCGTAATTAAAGATTCGTCAACTGGCATCGTTTCCGGCAGTAGAAAACAA
AAGCTTCGGTCTTGAAGAGACAGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_173047 cinnamoyl coa reductase 1 [Arabidopsis thaliana] | 1673 | 4e-184 |
| XP_002890139 hypothetical protein ARALYDRAFT_471794 [Arabidopsis lyrata subsp. lyrata] | 1667 | 2e-183 |
| AAG46037 cinnamoyl CoA reductase isoform 1 [Arabidopsis thaliana] | 1663 | 5e-183 |
| ADC40029 cinnamoyl-CoA reductase [Isatis tinctoria] | 1662 | 7e-183 |
| NP_001077544 cinnamoyl coa reductase 1 [Arabidopsis thaliana] | 1546 | 2e-169 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P51104 Dihydroflavonol-4-reductase | 612 | 2e-062 |
| Q9XES5 Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase | 591 | 5e-060 |
| Q84KP0 Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase | 582 | 5e-059 |
| P51103 Dihydroflavonol-4-reductase | 543 | 2e-054 |
| P51110 Dihydroflavonol-4-reductase | 543 | 2e-054 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9S9N9 Cinnamoyl CoA reductase 1 | 1673 | 3e-184 |
| Q9FPM0 Cinnamoyl CoA reductase isoform 1 | 1663 | 4e-183 |
| D3J7Z3 Cinnamoyl-CoA reductase | 1662 | 5e-183 |
| A8MQW5 Uncharacterized protein At1g15950.2 | 1546 | 1e-169 |
| C0Z2K0 AT1G15950 protein | 1539 | 9e-169 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G15950.1 CCR1 (CINNAMOYL COA REDUCTASE 1); cinnamoyl-CoA reductase | 1673 | 1e-186 |
| AT1G15950.2 CCR1 (CINNAMOYL COA REDUCTASE 1); cinnamoyl-CoA reductase | 1546 | 7e-172 |
| AT1G80820.1 CCR2 (CINNAMOYL COA REDUCTASE); cinnamoyl-CoA reductase | 1438 | 2e-159 |
| AT5G19440.1 cinnamyl-alcohol dehydrogenase, putative (CAD) | 809 | 2e-086 |
| AT1G51410.1 cinnamyl-alcohol dehydrogenase, putative (CAD) | 754 | 5e-080 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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