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Information for unigene UN20221
| FASTA Sequence |
| Unigene ID: UN20221 | Length: 786 |
| SNP | ATTAACTTAATTTATCATAATCTTAAAAAGCTTTTAGAGCCAGACATAAATCTACAAATAATTTATAAACCAAGAAAAACCATTCA
TGGATGGAACCAGCACTCTCATTAACAAATCAATGTCCATTTGATTCCAACACCCTTTATAAGTAGTACAAAACACCTTATGTAAG
TAAAACTGAAAGAGAAGCCTCTACATGGATCAGAGACACACTTTCGCTTTTACACACACAATTTATTAGTTAACGGTGACTTTACC
GACCATACCAGCACCCTGATGCGGGGCACAGTAGAAGCTGTAAGTCCCAGGCTCAGTCAAAGCAACCTCGTACGTCTCTCCAGCGG
CGTTGAGTAGGTCCTGCTCGTCCATGGAGATCTTGCTCGCGTCAACACCGCTCGGGATCTCGTCCTCATCGAACACAACGTTGTGC
GGGAATCCAGCGTTGTTCTTGAACACGATCTTCTCTCCTTTCGCTATCGTGAACTCGTTGGGAACGAAAGCCAACGCTCCATCTCC
TGATCCCAAGAGAACGTCTATGGCCATGGCGTTTCCTGCCAAAGCGATGGAAGCTGCAGCCGCTACGGCAGCGACTCCGAAGTCCT
TTAGAGATGACTTCACGGTGAGGTTCCGTGATGTTGTGGTGGGGAGCCTGACGACGGCGGAGGGTTTGGAGACTGTGGATTTCAGG
CCGGTGAACGATGGGATTGCGACGGTGGCTGAGGTTATTGAGGCCATGATGTTGTGGTGGGGAGTCTTGATTTTTTTTGGTGGGTT
ATCCTTTGGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33832 unnamed protein product [Thellungiella halophila] | 762 | 7e-079 |
| XP_002893099 DNA-damage-repair/toleration protein 112 [Arabidopsis lyrata subsp. lyrata] | 708 | 1e-072 |
| NP_173459 Plastocyanin major isoform [Arabidopsis thaliana] | 706 | 2e-072 |
| AAM64356 plastocyanin, putative [Arabidopsis thaliana] | 705 | 3e-072 |
| CAB66894 putative plastocyanin [Arabidopsis thaliana] | 699 | 1e-071 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P42699 Plastocyanin major isoform, chloroplastic | 706 | 1e-073 |
| P11490 Plastocyanin minor isoform, chloroplastic | 636 | 1e-065 |
| P00289 Plastocyanin, chloroplastic | 588 | 5e-060 |
| P00299 Plastocyanin A, chloroplastic | 582 | 2e-059 |
| P16002 Plastocyanin, chloroplastic | 580 | 4e-059 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6SZV4 Putative uncharacterized protein | 598 | 5e-060 |
| B9R8G0 Plastocyanin A, chloroplast, putative | 586 | 1e-058 |
| B7FH62 Putative uncharacterized protein | 585 | 2e-058 |
| C6SVR0 Putative uncharacterized protein | 585 | 2e-058 |
| B9H5C6 Predicted protein | 582 | 4e-058 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G20340.1 DRT112; copper ion binding / electron carrier | 707 | 7e-075 |
| AT1G76100.1 PETE1 (PLASTOCYANIN 1); copper ion binding / electron carrier | 637 | 9e-067 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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