 |
Information for unigene UN21544
| FASTA Sequence |
| Unigene ID: UN21544 | Length: 1233 |
| SNP | GGGACACAACCAAAATTCATCTTAACGAGAACACAAGTTAAGAAGAATAAAAAGAGAACCACGTTTAGTTTGTAGTATATGAGAGC
TGCTTTAAACAGAGCAAATCTTCTTGGAGGGTTGTTTTCATTCAGAAACGTTAAATCGATGTCGTCGTCGTCTTCTTCTCAAAACT
TTGTATCAAGATCTGTAATCAAGAAAGTCTTCGCTAAGCTTCAGAAAGAAGGCGATGGAGCGGTCGTTAGACGTGGCATTTCCAGG
AGTGAGCAGAAGTTATTAGATCCGTTCTTGATGCTTGATGAATTCTCCGTTTCTCCTCCAGCTGGATTCCCAGATCATCCTCACAG
AGGTTTTGAAACTGTTACATACGTCCTAGAGGGAGGAATCACTCATCAAGATTTCAAAGGCCATAAGGGCACAATATATGCTGGTG
ATGTTCAGTGGATGACTGCAGGAAGAGGAATCATTCACTCTGAAATGCCTGAAGAAGAAGTTAACAAAGGTTTACAACTTTGGATC
AATCTGTCATCTAACGAGAAAATGATAGAGCCAAACTACCAAGAACTGTCGATTTCAGACATACCAAAAGCAGAAGAAAACGGTGT
TCAAGTCAAAGTAATAGCAGGAGAATCAATGGGAGTTCAATCCCCTGTTTACACAAGAACACCAACAATGTTCCTCGATTTCACTC
TCGATCCAGGAGCTCAGTTCCACCAGAACGTTCCTGAATCTTGGAATGCGTTTGCTTACGTTCTTGAAAGCGGTGAAGGCGGAGCT
GTTTTCGGCTCACCAAACGCGTCCCCTGTTTCACCACACAATGTTTTAGTGTTCGGACAAGGAAATGACGGTGTTAGCGTGTGGAA
CAAGTCAGCTTCCAAGAAATTGCGGTTTGTGTTAATTGCTGGAGAACCAATAGGTGAGCCGGTGGTTCAGTACGGTCCGTTCGTGA
TGAATACTCAAGCTGAGATTGATATGACCATTGAAGATTATCACTATGGTAAAAATGGCTTCGAAATGGCAAAGTATTGGAGGTCA
CAATGATAGATACTAATAATAATCAATGTTTTAATTATTGTTTTCATACTTGTTTTTATCTTATGTGTGTTTTGAATGGGACAATA
ATAAAGTTTAAAACCCAGTTTCTTTTTGCTTAAGTATGTGGGTGGGAACCCATTAAATTCAAAGCTGACTTTGTTTGTAGTTCCAA
ATTCCAACCGTAGTGGTCGTTATTATGCT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880027 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1566 | 9e-172 |
| NP_850385 pirin-like protein [Arabidopsis thaliana] | 1534 | 4e-168 |
| ABK95380 unknown [Populus trichocarpa] | 1135 | 8e-122 |
| XP_002320452 predicted protein [Populus trichocarpa] | 1134 | 1e-121 |
| XP_002302888 predicted protein [Populus trichocarpa] | 1122 | 3e-120 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZW82 Pirin-like protein At2g43120 | 1534 | 2e-169 |
| Q9LX49 Pirin-1 | 1104 | 1e-119 |
| Q9SEE4 Pirin-like protein | 992 | 1e-106 |
| Q9LX45 Putative pirin-like protein At3g59260 | 978 | 6e-105 |
| Q9LPS9 Pirin-like protein At1g50590 | 897 | 1e-095 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PG77 Putative uncharacterized protein | 1135 | 6e-122 |
| B9IAC9 Predicted protein | 1134 | 7e-122 |
| B9GU87 Predicted protein | 1122 | 2e-120 |
| Q147N7 At3g59220 | 1095 | 2e-117 |
| B9SN16 Pirin, putative | 1088 | 2e-116 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
