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Information for unigene UN21546
| FASTA Sequence |
| Unigene ID: UN21546 | Length: 680 |
| SNP | CAATCTAAAGAACGGACTCTTTCGGGTCGGAACAACAATACGAAGCAAAAAAAATCCCAGAGATGTCGATGATGTCAGCGTCTTCG
GCGTTTGTTTTGACGGCTAACGTTACGGCGGCCACCGGCCCTTCGTCTTCAAGGAACTCAGTGTCTTTCCTACCGATGAGAAGGGC
TGGTTCCAGACTTGTAGTCAGAGCAGCCGACGAGGCGGCTTCAGAAACATCTTCTTCAGAAGGTGCACCAGCAACTGCCGTGGCTC
CGGCTGGAGCTGCTGCCACCAAACCAAAACCGCCTCCGATCGGCCCTAAGAGAGGGTCCAAGGTCAAGATCCTAAGGAGAGAATCC
TATTGGTTCAAGAACGTTGGAGCAGTTGTGGCCGTTGATCAGGATCCAAAGACTCGGTACCCTGTTGTGGTCCGGTTCGCGAAAGT
GAATTACGCCAACATATCGACCAACAACTATGCGTTGGATGAGGTTGAAGAAGTCAAAGCTTAAAAAATGAGAGCTGAAAAACAAT
TGTGTGTACTTTGGTTTAATGTTTATACCATTCTGTCTGTCTGTAACTCGACTTATGTACCGACAAGTTTTACCATTATTTAATTC
TCGAGTCAGAAAATAATTACATCACCGGTGGATTCATCATCTCTCAGCTCATGGTTAACTCTTTAACCATGTCATGTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002867438 hypothetical protein ARALYDRAFT_491882 [Arabidopsis lyrata subsp. lyrata] | 615 | 6e-062 |
| NP_567818 photosystem I reaction center subunit IV A [Arabidopsis thaliana] | 583 | 3e-058 |
| AAN41281 putative photosystem I subunit PSI-E protein [Arabidopsis thaliana] | 577 | 1e-057 |
| XP_002885991 hypothetical protein ARALYDRAFT_899838 [Arabidopsis lyrata subsp. lyrata] | 530 | 4e-052 |
| NP_179616 photosystem I reaction center subunit IV B [Arabidopsis thaliana] | 513 | 4e-050 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S831 Photosystem I reaction center subunit IV A, chloroplastic | 583 | 1e-059 |
| Q9S714 Photosystem I reaction center subunit IV B, chloroplastic | 513 | 2e-051 |
| P13194 Photosystem I reaction center subunit IV, chloroplastic | 396 | 7e-038 |
| Q41228 Photosystem I reaction center subunit IV A, chloroplastic | 386 | 1e-036 |
| Q41229 Photosystem I reaction center subunit IV B, chloroplastic | 381 | 4e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8H127 Putative photosystem I subunit PSI-E protein | 577 | 1e-057 |
| Q8LC58 Photosystem I reaction center subunit IV B, chloroplast (PSI-E B) | 507 | 1e-049 |
| Q9FDY5 Putative photosystem I subunit PSI-E (Fragment) | 503 | 4e-049 |
| Q7FY22 AT4g28750 | 478 | 3e-046 |
| B9S592 Photosystem I reaction center subunit IV A, chloroplast | 458 | 6e-044 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G28750.1 PSAE-1 (PSA E1 KNOCKOUT); catalytic | 584 | 1e-060 |
| AT2G20260.1 PSAE-2 (photosystem I subunit E-2); catalytic | 513 | 2e-052 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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