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Information for unigene UN22367

FASTA Sequence
Unigene ID: UN22367Length: 1156  SNP
GGACAAGAGAAGAGTCTTCGTCAGTCGGTGGAGTTTGTTTACTTCATTTACACTTTCCTTCTGCTGCGGATCCGAATCGAAAAAAT
GAATCGTCATCACGATCCCAATCCTTTCGATGAAGAAGAAGACGAGATCGTCAATCCCTTCTCGAAAGGAGGTGGCGGCGGTGGAA
GGCCTGTGGCATCTAGGCCGTTTAACGTTGATGCTACCGTCGATATTCCATTGGATACGGTGAATGACTCTTCAAAGAAACAGAGG
GAGCTTTCTGATTGGGAATCTGAGCTTAAGAAGAGAGAAATGGATATTAAAAGAAGAGAAGATGCTGTTGCTAAATCTGGCGTGAA
GACAAGCAATAAAAACTGGCCACCTTTTTTCCCTATTATACACCACGACATTGCTAATGAGATACCAGTCCATGCTCAGAAACTGC
AATATCTGGCATTTGCTAGTTGGTTGGGCATAGTTTTGTGTCTCGTATTCAATGTCATTGCAGTGATAGTCTGCTGGATTAAAGGC
GGAGGTGTCAAAATCTTTTTTCTTGCCACGATCTATGCGCTGCTTGGATGTCCAATTTCATATCTATTGTGGTATAGGCCTCTCTA
CCGAGCTATGAGGACTGACAGCGCTCTGAAGTTCGGTTGGTTTTTCTTCTTCTACCTGATTCACATTGGCTTCTGCATCTTTGCCG
CCATTGCTCCTCCGATCTTTTTCCGCGGCTTATCATTAACGGGTGTGCTGGCAGCAATTGATGTAATCAGAGCCAGTTTACTAGCC
GGGATCTTCTACTTTGTCGGCTTCGGTCTGTTCTGCTTGGAGGCGCTTCTCAGTGTGTGGGTTCTCCAGAAAATATACATCTACTT
CAGGGGAAACAAGTAAACAATGCATATACACTAGAGCAAAAGGTCATACTTCTCCAACGATACCGCTCTCTTAGAAGGTTTGAGTA
TAGTACTATACTATCTTGCTACTAATGTAATTACCATTTGTGCACTTGTCTGGGATAATACTCTGTTGTGATGTGTTTGTATTTTG
TTTTATTGTGTGGTGCTGTCTTCGTTTAGTAGTTGCAGTGGCAAAATAAATACTCTATGTTCTGTTATTACGTTGAGGATTGACAT
TTTTGGGGTTGCAAAAGAGTATAGATTTATCTAAATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33899 unnamed protein product [Thellungiella halophila]12746e-138
XP_002890966 secretory carrier membrane protein family protein [Arabidopsis lyrata subsp. lyrata]11958e-129
NP_174485 secretory carrier-associated membrane protein 4 [Arabidopsis thaliana]11823e-127
BAH20345 AT1G32050 [Arabidopsis thaliana]11771e-126
XP_002303454 predicted protein [Populus trichocarpa]10595e-113

Swiss-Prot top hits (Blast detail)Scoree value
Q9C6X2 Secretory carrier-associated membrane protein 411821e-128
Q0JAI9 Secretory carrier-associated membrane protein 69884e-106
Q6Z8F5 Secretory carrier-associated membrane protein 59168e-098
Q9ZTX0 Secretory carrier-associated membrane protein8738e-093
Q9SKT3 Secretory carrier-associated membrane protein 18478e-090

TrEMBL top hits (Blast detail)Scoree value
B9DHX8 AT1G32050 protein11777e-127
A9PF06 Predicted protein10593e-113
B9MUA3 Predicted protein10576e-113
B9DI68 AT1G32050 protein (Fragment)10567e-113
C6TC38 Putative uncharacterized protein10362e-110

Arabidopsis top hits (Blast detail)Scoree value
AT1G32050.1 secretory carrier membrane protein (SCAMP) family protein11838e-130
AT2G20840.1 secretory carrier membrane protein (SCAMP) family protein8477e-091
AT1G03550.1 secretory carrier membrane protein (SCAMP) family protein8039e-086
AT1G61250.1 SC3 (SECRETORY CARRIER 3); transmembrane transporter8002e-085
AT1G11180.1 secretory carrier membrane protein (SCAMP) family protein7634e-081

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  15%
 
114  31%
 
123  23%
 
62  15%
 
92  15%

Unigene MembersMember information