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Information for unigene UN23050
| FASTA Sequence |
| Unigene ID: UN23050 | Length: 895 |
| SNP | GGAAGCGAACGTATTAGGGTTTGCTCTTGTACCCTAAACTCCACACCGAAACCCGCCGCCGTCGCTCTCAAGAAAGATGAAGACGA
TCTTGTCATCCGAGACGATGGACATCCCCGAAGGCGTCGTGATCAAGGTCCACGCCAAGGTGATCGAAGTAGAAGGCCCACGCGGG
AAACTCACTCGTGATTTCAAGCATCTCAACCTCGATTTCCAGCTCATCACAGACGCCGTCACCGGCAAGCGACAGCTCAAGATCGA
TTCTTGGTTCGGATCCCGCAAAGCCAGTGCTTCCATCAGGACCGCTCTGAGCCACGTCAGCAATCTCATCGCCGGTGTCACACAGG
GTTTCCTTTACAAGATGAGGTTTGTGTATGCTCATTTCCCCATCAATGCTTCAATCTCCGGTGACAACAAGTCTATTGAGATCCGT
AACTTCCTTGGGGAGAAGAAGGTCAGGAAGGTTGATATGTTGGATGGTGTTACCATTGTTCGGTCTGAGAAGGTTAAGGATGAGAT
TACTCTTGAGGGAAATGATATCGAGCTAGTTTCACGCTCATGCGCTTTGATCAACCAGAAATGCCATGTGAAGAAGAAGGATATCA
GAAAGTTTCTTGATGGTATTTACGTGAGCGAGAAGGGCAAGATCGCTGTTGAAGAATGAAGAGAGTATGGTGTGGAAGAGTGATAT
AGTCGTAGCTTTCTGTTCACTTCTCATATGGGTTTGTAGTTTTGATTTCTTTGGACCAATTGATAATGCAAACTTATTATTATCCT
TTATGTTTGGGTTTTTATTTACCCTTTTCTATTTAAAGTTTTTGAGACTATTTTATTCTCTGCTTATTCTTGGAATTGGTTTTGAG
ATATGCTATTTTATTGTGCTTGAAAGAGTATCTAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_192783 60S ribosomal protein L9-2 [Arabidopsis thaliana] | 913 | 3e-096 |
| XP_002874628 60S ribosomal protein L9 [Arabidopsis lyrata subsp. lyrata] | 913 | 3e-096 |
| XP_002891031 60S ribosomal protein L9 [Arabidopsis lyrata subsp. lyrata] | 872 | 2e-091 |
| NP_564417 60S ribosomal protein L9-1 [Arabidopsis thaliana] | 870 | 3e-091 |
| AAM63736 ribosomal protein L9, putative [Arabidopsis thaliana] | 866 | 8e-091 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SZX9 60S ribosomal protein L9-2 | 913 | 1e-097 |
| P49209 60S ribosomal protein L9-1 | 870 | 1e-092 |
| P30707 60S ribosomal protein L9 | 838 | 6e-089 |
| P49210 60S ribosomal protein L9 | 752 | 6e-079 |
| Q3SYR7 60S ribosomal protein L9 | 528 | 5e-053 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LCC2 Ribosomal protein L9, putative | 866 | 5e-091 |
| Q38M76 Putative uncharacterized protein | 844 | 2e-088 |
| Q307X4 Putative uncharacterized protein | 836 | 2e-087 |
| B7FN14 Putative uncharacterized protein | 828 | 1e-086 |
| B9RYZ1 60S ribosomal protein L9, putative | 828 | 1e-086 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G10450.1 60S ribosomal protein L9 (RPL90D) | 914 | 9e-099 |
| AT1G33120.1 60S ribosomal protein L9 (RPL90B) | 871 | 8e-094 |
| AT1G33140.1 PGY2 (PIGGYBACK2); structural constituent of ribosome | 871 | 8e-094 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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