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Information for unigene UN23096
| FASTA Sequence |
| Unigene ID: UN23096 | Length: 1228 |
| SNP | GGCAGAAATAATAATGGCCAATAATTCGATTACAAAGGATCAAAACATTACAAAGTCATTGTTATTCAATCAAACAGTAGAGAAAG
AAAACTTTACTTGTTCTTCATGTATGTATCAGCTACTGATATTGATTTCATTCTAGAAGAAAAGGCACATTTAATGGAAACCTTAA
GTTCAGAAAAGGCCCCCATCAAAATAAAAGTGCCAAGCCGAAACATTACCTTCAGGCCATCGATCAAGCTGCTGCAAGTGGCTGAA
GAGCTTTAAGAGGGTTCATGATAACACCATCGATAAGCCCGTAATCTTTTGCTTCTTTAGCGCTCATGAAGAAATCACGGTCTGTG
TCTTGGTTTATCCTCTCAAGGCTTTGACCAGTTTGGTAAGCGAGGTAACCGTTTAGGTTTGCCTTGTGATGCAGCATTTCATTTGC
CTGAATGTCGATATCGGTTTGGCCACCTTGAGCTCCACCAAGCGGCTGATGGATCATTATCCTTGAGTTTGGCAGACTGTATCTTT
TCCCTTTGGTTCCAGCACTAAGCAGAAATGCTCCCATACTAGCAGCTAGACCGACACAAACAGTGGAGACATCAGGTCGGATATGC
CTCATAGTGTCGAATATAGCCATGCCAGCTGTAACTGATCCACCAGGAGAATTCACATACATGACAATATCCTTAGTGGGATCAAC
AGCATCAAGGTAGAGAAGCTGAGCCACGATTATGTTGGCCATATCATCATCAACAGCACCACCACAGCGAATAATCCTATATTGGA
AGAGCTGGCTTATGATACTCTGGAAACGCTCTTGAACCATAGGAGGTGGTCCTTGTCCTTGAGCGTACACAGGAAAGTAAGGCGAA
GAAGGCACTTGTAAATCATCTCTGATGGACCAAACTCCTTGCGGCGAAGGAGTCTCCGGTGTCCAGAGATTGCCGGAGTATACAGC
CTTCGGAGTTGACGAGCTCTTCCAATTCTTTCTGCTGCTAACTAACTTCTTCGTCTTCCTTGAACGAAGGGGCTCGAAAGGGAGAG
AAAGCTTCTGAGAATCGAAAGAGGAGGCGTTGGGACTCGCGGAGACGAATCCAGCTGCAAACCTGAGAGAAGAAGCCGATGTGGAG
ACGCAAGCGTGAGCCATCTTCTTGTCCAACGAAACCCTAATTTCGTCACCGGCGAGGCTTATCCTTCCGAAATTTGGGGATTTTTC
GAAGAGTGACTAATCTGACTACCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889406 hypothetical protein ARALYDRAFT_887394 [Arabidopsis lyrata subsp. lyrata] | 1482 | 5e-162 |
| NP_563657 ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana] | 1473 | 5e-161 |
| XP_002515273 ATP-dependent Clp protease proteolytic subunit, putative [Ricinus communis] | 1270 | 2e-137 |
| ABA41488 ATP-dependent Clp protease proteolytic subunit [Carica papaya] | 1261 | 2e-136 |
| ACU23464 unknown [Glycine max] | 1199 | 3e-129 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S834 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic | 1473 | 2e-162 |
| Q3MFR5 ATP-dependent Clp protease proteolytic subunit 1 | 646 | 2e-066 |
| Q8YXH5 ATP-dependent Clp protease proteolytic subunit 1 | 643 | 4e-066 |
| Q2JIP1 ATP-dependent Clp protease proteolytic subunit 2 | 611 | 2e-062 |
| Q0AWF0 ATP-dependent Clp protease proteolytic subunit | 609 | 3e-062 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RND4 ATP-dependent Clp protease proteolytic subunit | 1270 | 1e-137 |
| B8K1W3 ATP-dependent Clp protease proteolytic subunit | 1261 | 1e-136 |
| C6TKM4 ATP-dependent Clp protease proteolytic subunit | 1199 | 2e-129 |
| B9GST6 ATP-dependent Clp protease proteolytic subunit | 1185 | 9e-128 |
| Q93YH0 ATP-dependent Clp protease proteolytic subunit | 1151 | 8e-124 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G02560.1 CLPP5 (NUCLEAR ENCODED CLP PROTEASE 5); serine-type endopeptidase | 1479 | 4e-164 |
| AT1G66670.1 CLPP3; serine-type endopeptidase | 491 | 1e-049 |
| AT5G45390.1 CLPP4 (CLP PROTEASE P4); serine-type endopeptidase | 474 | 1e-047 |
| AT5G23140.1 NCLPP7 (NUCLEAR-ENCODED CLP PROTEASE P7); serine-type endopeptidase | 443 | 5e-044 |
| AT1G11750.1 CLPP6; serine-type endopeptidase | 394 | 3e-038 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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