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Information for unigene UN24019

FASTA Sequence
Unigene ID: UN24019Length: 1164  SNP
GGGAAAACAGCTAAAATCACAAATGACTCATCTTCTCCGCCAAGAGAGAATCTAGGGTTCCAGATTTACTCTTTTCTCTTCCCTAT
CCTCTCTTCGATTTACACACATCCCTCAATCTCTGTACATTTCAGAGAACCTTTTAGCTTTCTCTACCGCTTTTACCTGTTTTTAG
CTTCTTTCCCATGGCGAAAACTCGACCTGGTGTCCCCTCCAAAATCAAAACCGGAAGGAAGGAGCTTGACTCTTATACCATCAAAG
GAACCAACAAAGTCGTCAGAGCTGGAGAGTGTGTGTTGATGCGCCCATCGGATGCTGGCAAGCCACCATACGTGGCACGTGTCGAG
AAGATCGAAGCTGATGCTAGGAACAATGTGAAGGTGCATTGTCGTTGGTACTACCGCCCTGAGGAGTCCCTTGGTGGTAGAAGGCA
GTTCCATGGAGCTAAGGAACTTTTCTTGTCCGACCATTTCGACGTTCAGAGCGGACACACCATCGAAGGGAAATGCATTGTTCACA
CCTTCAAGAACTACACCAGGCTCGAAAACGTTGGGGCTGAGGATTATTATTGTAGGTTTGAGTACAAGGCTGCCACTGGCGCCTTC
ACCCCTGATCGAGTTGCTGTGTACTGCAAGTGTGAAATGCCTTATAACCCAGATGATCTCATGGTTCAATGTGAAGGCTGCAAAGA
CTGGTACCATCCGGGGTGTGTTGGTATGACGATTGAAGAAGCAAAGAAGCTTGATCACTTTGTATGTGCTGAATGCAGTTCTGATG
ACGATGTCAAGAAGTCGCGGAACGGATTTGCTGAGTCTCCAGCTGATGATGTCAAGGTGGAAACAAAGCGCAGAAAAAGATAATCG
CCAGGTTCTGATGAGTAAAAGCCGCGCAGGGGTTGTCAAGTTGTAACTTGTAAGCTCTTTGGTGCATATTTAAAGTAAGTTAGGAT
TTGTGTCGTCTTTGTTGTGATGATGCCTTGTATGTTGCGTTCCAAAAACTTTAAGAGAAAATGTGAAAAAAAGGAGAGATGATGAT
GAAGACAAGTTATGGTGGGCAGAGTCTGTATAGACTTTTCCGTGGGATCTTTTAAGTTAACTTTTAGGTCTGTTTATTGTTGGTAA
TGTTGTTTTGTGTCTGATGAGTACCAGAAGAACATGAAGAGCGCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001031695 PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana]11931e-128
NP_193945 PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana]11582e-124
XP_002867787 DNA binding protein [Arabidopsis lyrata subsp. lyrata]11528e-124
XP_002518423 phd finger transcription factor, putative [Ricinus communis]10542e-112
XP_002331556 ebs-bah-phd domain-containing protein [Populus trichocarpa]10434e-111

Swiss-Prot top hits (Blast detail)Scoree value
O75151 PHD finger protein 21613e-010
Q9WTU0 PHD finger protein 21586e-010
Q3UWM4 Lysine-specific demethylase 71443e-008
Q6ZMT4 Lysine-specific demethylase 71408e-008
Q08D35 Lysine-specific demethylase 71362e-007

TrEMBL top hits (Blast detail)Scoree value
Q56W44 Receptor like protein11931e-128
B9RXF4 Phd finger transcription factor, putative10541e-112
B9N8F2 Ebs-bah-phd domain-containing protein10432e-111
B9HZB2 Ebs-bah-phd domain-containing protein10405e-111
C6T7C3 Putative uncharacterized protein10262e-109

Arabidopsis top hits (Blast detail)Scoree value
AT4G22140.2 DNA binding / protein binding / zinc ion binding11944e-131
AT4G22140.1 DNA binding / protein binding / zinc ion binding11586e-127
AT4G04260.1 bromo-adjacent homology (BAH) domain-containing protein7581e-080
AT4G39100.1 SHL1 (short life); transcription factor/ zinc-mediated transcriptional activator7222e-076
AT4G23120.1 bromo-adjacent homology (BAH) domain-containing protein1182e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
127  50%
 
102  14%
 
82  14%
 
212  14%
 
191  7%

Unigene MembersMember information