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Information for unigene UN24243

FASTA Sequence
Unigene ID: UN24243Length: 854  SNP
GGAAAAGGTTAAATCGTGCATGAACAATAAAAATGGAGTTTTGGAGGATTAGTCTAGTGGCGATAGCAATAGCATTAATAATGGCG
ACGATGGTGGCTGCTGGTGAGGACAAGGCGAAGGATAAGGAAGAGTGTACCGAGCAGCTTGTGGGTATGGCCACATGTCTTCCTTA
CGTGCAAGGACAGGCAAAGACTCCGACGCCGGACTGTTGCTCAGGCTTAAAACAGGTTCTCAAATCCGACAAGAAGTGTCTTTGTG
TGATCATCCAAGACAGGAATGATCCTGACTTGGGTCTCCAGATCAACGTCTCTCTCGCTCTTGCTCTTCCTACTGTTTGCCACGCC
GTTGCTGACGTCACCAAGTGCCCTGCTTTGCTTCATATGGACCCAAAATCTCAAGAAGCCCAAGTGTTCTATCAGCTGGCAAACGG
TTTAAACAAAACTAGCCCAGCCTCTGCTCCTGCCGGTTCGGCCCCTGAGCCCACAAGTATATCTCCAACCGCAGGATCCGATGGTA
ACAACAGTGGCCGGACGACCTCTTTGCCAAGCAAGAACCACGCTCATAGCTTTCGGAAACGGTGGCTAAGGCTTGAAGTTGTTGCC
CAACTCTTCATAATATCATTTATTATCACCGTTTAAAAATAGTACTGTATTGAAAAGTGAATTTGTGCGGTTGCAGTGAGTCGGTG
CCATTGATTTTATGCAGTTACTGTTTCGTGAGAACTCTTCCCAACTTTTTTTTTGTATGACGCAAAATAAGACACGAGTTACAGTT
TTTGTATTATCTCGTATGCTTTTATCATTTTTTTCTGAAAAAGATCTTGCTCTATAAAAATATAAACTCAACATACACGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_181959 xylogen-like protein 10 [Arabidopsis thaliana]8066e-084
XP_002881958 protease inhibitor/seed storage/lipid transfer protein family protein [Arabidopsis lyrata subsp. lyrata]8041e-083
XP_002881957 protease inhibitor/seed storage/lipid transfer protein family protein [Arabidopsis lyrata subsp. lyrata]7994e-083
NP_181958 xylogen-like protein 10 [Arabidopsis thaliana]7654e-079
XP_002330863 predicted protein [Populus trichocarpa]4966e-048

Swiss-Prot top hits (Blast detail)Scoree value
Q9C7F7 Uncharacterized GPI-anchored protein At1g279501844e-013
Q9ZQI8 Non-specific lipid-transfer protein-like protein At2g138201683e-011
Q8VYI9 Non-specific lipid-transfer protein-like protein At5g640801396e-008

TrEMBL top hits (Blast detail)Scoree value
O64865 Non-specific lipid-transfer protein8064e-084
O64864 Non-specific lipid-transfer protein7653e-079
B9N6J8 Predicted protein4964e-048
C6TMC6 Non-specific lipid-transfer protein4822e-046
C6T201 Non-specific lipid-transfer protein (Fragment)4794e-046

Arabidopsis top hits (Blast detail)Scoree value
AT2G44300.1 lipid transfer protein-related8063e-086
AT2G44290.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)7652e-081
AT1G55260.1 lipid binding3091e-028
AT3G58550.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein2491e-021
AT1G27950.1 LTPG1 (GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 1)1844e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  18%
 
94  36%
 
62  18%
 
73  27%

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