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Information for unigene UN25600

FASTA Sequence
Unigene ID: UN25600Length: 941  SNP
CTGATAAGAACGATTTGATAGATGATCTTCGAGTAGTTCGAAACATTAACAGTAAAGAGTTGAAAGAGTGATAAAAATCACAGACG
CAATGATTTACATGTGACACCCTAACCAAAATAACAGCAACCCATCAGATAAGAACCAATTGATACATTATGAAGAATAAAACCAG
TTTTGTATAAAAGCAAACATCATCAAACGAGAGTGTATTACATCATAGTTATTAGTCTGCATGCATGTCCATTGAGGAATCAAAAG
AGCCTGGAGAGTTAGATCCCCTGTTCAGTTCACTGCTTCTGGTTGCGCCAGATATGTAGCCTCCCTGCGGAATTTGGTAGTTTTGA
AGGCTACGGCGTATGGGGCTTGAAAGGGCGTTTGAGAAAACCGAGTTCTTCACCTGGTTTTCGCATTGCTCAGACCGAACCACTGG
AACAGCTGTTGGGCAAGACGTGCCTGAAGAGGCCATGAGCCCGGCATTCATTGCCGGTTGTGTTGGCGGCGCTCTTGGGGAAATTG
GGGGCTCCTCTGTGCAGCACTCTAGCTCGTTCTGAATGTAATTGATTATATCCATAGACGTCACTCTTGACCCTCCTTCTTGTTGT
CTCCATATCCATTGGTACAATTTTTCGAGACCATGGCGTTCACCGGCTTGGAAAGATAATTTCTGGTGGTTCATGGACTGAGTATA
AAGCTGAGATAACGAGTTCGCGGCGGTTCGAAACGAGGCGTAAACAGTCCGATCTACCTCATCGAGGCTCGTCGCTGTAGCTTTTC
TCTTCTTCCCCATCTCTTAAAGATTGATTCTTCTAGAAATCGGAATCGGATCTTCTTCGCCTAATTTAGACGGCCACGATTTCTCC
GTCGGCGATTAACGGATGGTCGTTGTTCTCTATCGATCAATCGGCGATTCTGATAAATTATAAAGACAGCAGATTGGACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872465 hypothetical protein ARALYDRAFT_352054 [Arabidopsis lyrata subsp. lyrata]8821e-092
NP_192721 uncharacterized protein [Arabidopsis thaliana]8694e-091
AAM62508 unknown [Arabidopsis thaliana]8613e-090
XP_002300905 predicted protein [Populus trichocarpa]6151e-061
XP_002524331 conserved hypothetical protein [Ricinus communis]5925e-059

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9SZ98 Putative uncharacterized protein AT4g098308693e-091
Q8LER6 Putative uncharacterized protein8612e-090
B9GT77 Predicted protein6157e-062
B9SEB2 Putative uncharacterized protein5923e-059
B9H7W0 Predicted protein5809e-058

Arabidopsis top hits (Blast detail)Scoree value
AT4G09830.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP009193 (InterPro:IPR016549); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64780.1); Has 56 Blast hits to 56 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).8701e-093
AT5G64780.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP009193 (InterPro:IPR016549); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09830.1); Has 56 Blast hits to 56 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3484e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  21%
 
124  21%
 
87  37%
 
102  11%
 
112  11%

Unigene MembersMember information