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Information for unigene UN26180

FASTA Sequence
Unigene ID: UN26180Length: 379  SNP
GGAGACCTGCAAGAACTTCCAAAACACACAAAGAAAAACTAAATAAAAAGAAGCGAAAAAGTCTTTCAGGTCTCAACAATGGAGAT
GAAGAAGATCGCTTACGGTGTGCTTTTCGCTGCTGCTTCCATGACCGCGGTCATGGCTGTGGAGGAAGCCGGAGCTCCGGCACCAG
GACCCTCATCTGCCGCCTCGGCTGCATTGCCGGCTCTTGGCTCTCTTGTTGGAGCTTCCCTTGTATCCCTTTTCAGCTACTACTTG
CACTAAGTTAATACCTTCCTACTATTAATGTGGTCTTTATTCATTTGCTACCTATTTCCATTTCATTTGTAATTAATAAAACTGAG
AAAGTAAATCAAGAATAATCTTTCTCTTCTTCATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191328 arabinogalactan protein 23 [Arabidopsis thaliana]2738e-023
AAD21078 pollen-specific arabinogalacta protein BAN102 [Brassica rapa subsp. campestris]2674e-022
AAM18712 arabinogalactan-peptide AGP23 [Arabidopsis thaliana]2674e-022
XP_002876432 expressed protein [Arabidopsis lyrata subsp. lyrata]2541e-020
NP_973662 uncharacterized protein [Arabidopsis thaliana]2201e-016

Swiss-Prot top hits (Blast detail)Scoree value
Q8S2W4 Arabinogalactan peptide 232733e-024

TrEMBL top hits (Blast detail)Scoree value
Q9XEY8 Pollen-specific arabinogalacta protein BAN1022673e-022
Q3EBI2 At2g419052208e-017
B9II47 Predicted protein1921e-013
B9N6U6 Predicted protein1921e-013
B9HNM7 Predicted protein1831e-012

Arabidopsis top hits (Blast detail)Scoree value
AT3G57690.1 AGP23 (ARABINOGALACTAN-PROTEIN 23)2743e-025
AT2G41905.1 unknown protein2214e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
124  24%
 
69  53%
 
71  6%
 
81  6%
 
102  12%

Unigene MembersMember information