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Each cell in the matrix shows the number of correspondences (and maps) between each pair. A correspondence is any relationship between two features.

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Matrix returns

Reference Set Genetic Reference Set
Raphanus sativus
  Budahn et al 2009  
  a b c d e f g h i  
Genetic Raphanus sativus
Bett & Lydiate 2003 (BC1) 		RS1 - - - - - - - - - RS1 Raphanus sativus
Bett & Lydiate 2003 (BC1) 		Genetic
RS2 - - - - - - - - - RS2
RS3 - - - - - - - - - RS3
RS4 - - - - - - - - - RS4
RS5 - - - - - - - - - RS5
RS6 - - - - - - - - - RS6
RS7 - - - - - - - - - RS7
RS8 - - - - - - - - - RS8
RS9 - - - - - - - - - RS9
  a b c d e f g h i  
  Budahn et al 2009  
Legend: Correspondences (Corresponding Maps)