BLASTX 7.6.2
Query= UN19797 /QuerySize=787
(786 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G38430.1 | Symbols: | ribulose bisphosphate c... 361 5e-100
TAIR9_protein||AT5G38410.1 | Symbols: | ribulose bisphosphate c... 359 1e-099
TAIR9_protein||AT5G38420.1 | Symbols: | ribulose bisphosphate c... 357 5e-099
TAIR9_protein||AT5G38410.3 | Symbols: | ribulose bisphosphate c... 353 1e-097
TAIR9_protein||AT1G67090.1 | Symbols: RBCS1A | RBCS1A (RIBULOSE ... 344 4e-095
TAIR9_protein||AT5G38410.2 | Symbols: | ribulose bisphosphate c... 336 1e-092
TAIR9_protein||AT1G67090.2 | Symbols: RBCS1A | RBCS1A (RIBULOSE ... 178 3e-045
>TAIR9_protein||AT5G38430.1 | Symbols: | ribulose bisphosphate carboxylase
small chain 1B / RuBisCO small subunit 1B (RBCS-1B) (ATS1B) |
chr5:15384350-15385155 REVERSE
Length = 182
Score = 361 bits (924), Expect = 5e-100
Identities = 171/182 (93%), Positives = 176/182 (96%)
Frame = -1
Query: 735 MAYSMLSSAAVVTSPAQTTMVAPFTGLKSSAAFPVTQKANNDITSIASNGGRVSCMKVWP 556
MA SMLSSAAVVTSPAQ TMVAPFTGLKSSA+FPVT+KANNDITSI SNGGRVSCMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWP 60
Query: 555 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 376
PIGKKKFETLSYLPDL+DVELAKEVDYLLRNKWIPCVEFELEHGFVYREHG+TPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120
Query: 375 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 196
YWTMWKLPLFGCTDSAQVLKEV+ECKKEYP AFIRIIGFDN RQVQCISFIAYKPPSFTD
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTD 180
Query: 195 A* 190
A*
Sbjct: 181 A* 182
>TAIR9_protein||AT5G38410.1 | Symbols: | ribulose bisphosphate carboxylase
small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) |
chr5:15377501-15378306 REVERSE
Length = 182
Score = 359 bits (920), Expect = 1e-099
Identities = 171/182 (93%), Positives = 175/182 (96%)
Frame = -1
Query: 735 MAYSMLSSAAVVTSPAQTTMVAPFTGLKSSAAFPVTQKANNDITSIASNGGRVSCMKVWP 556
MA SMLSSAAVVTSPAQ TMVAPFTGLKSSAAFPVT+K N DITSIASNGGRVSCMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWP 60
Query: 555 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 376
PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHG+TPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120
Query: 375 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 196
YWTMWKLPLFGCTDSAQVLKEV+ECKKEYP AFIRIIGFDN RQVQCISFIAYKPPSFT+
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTE 180
Query: 195 A* 190
A*
Sbjct: 181 A* 182
>TAIR9_protein||AT5G38420.1 | Symbols: | ribulose bisphosphate carboxylase
small chain 2B / RuBisCO small subunit 2B (RBCS-2B) (ATS2B) |
chr5:15381203-15381978 REVERSE
Length = 182
Score = 357 bits (915), Expect = 5e-099
Identities = 169/182 (92%), Positives = 174/182 (95%)
Frame = -1
Query: 735 MAYSMLSSAAVVTSPAQTTMVAPFTGLKSSAAFPVTQKANNDITSIASNGGRVSCMKVWP 556
MA SM SS AVVTSPAQ TMVAPFTGLKSSA+FPVT+KANNDITSI SNGGRVSCMKVWP
Sbjct: 1 MASSMFSSTAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWP 60
Query: 555 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 376
PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHG+TPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120
Query: 375 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 196
YWTMWKLPLFGCTDSAQVLKEV+ECKKEYP AFIRIIGFDN RQVQCISFIAYKPPSFT+
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTE 180
Query: 195 A* 190
A*
Sbjct: 181 A* 182
>TAIR9_protein||AT5G38410.3 | Symbols: | ribulose bisphosphate carboxylase
small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) |
chr5:15377501-15378306 REVERSE
Length = 187
Score = 353 bits (904), Expect = 1e-097
Identities = 171/187 (91%), Positives = 175/187 (93%), Gaps = 5/187 (2%)
Frame = -1
Query: 735 MAYSMLSSAAVVTSPAQTTMVAPFTGLKSSAAFPVTQKANNDITSIASNGGRVSCMKVWP 556
MA SMLSSAAVVTSPAQ TMVAPFTGLKSSAAFPVT+K N DITSIASNGGRVSCMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWP 60
Query: 555 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELE-----HGFVYREHGSTPG 391
PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELE HGFVYREHG+TPG
Sbjct: 61 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEVINTKHGFVYREHGNTPG 120
Query: 390 YYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKP 211
YYDGRYWTMWKLPLFGCTDSAQVLKEV+ECKKEYP AFIRIIGFDN RQVQCISFIAYKP
Sbjct: 121 YYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 180
Query: 210 PSFTDA* 190
PSFT+A*
Sbjct: 181 PSFTEA* 187
>TAIR9_protein||AT1G67090.1 | Symbols: RBCS1A | RBCS1A (RIBULOSE BISPHOSPHATE
CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bisphosphate
carboxylase | chr1:25048465-25049249 REVERSE
Length = 181
Score = 344 bits (882), Expect = 4e-095
Identities = 161/179 (89%), Positives = 170/179 (94%)
Frame = -1
Query: 735 MAYSMLSSAAVVTSPAQTTMVAPFTGLKSSAAFPVTQKANNDITSIASNGGRVSCMKVWP 556
MA SMLSSA +V SPAQ TMVAPF GLKSSAAFP T+KANNDITSI SNGGRV+CM+VWP
Sbjct: 1 MASSMLSSATMVASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWP 60
Query: 555 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 376
PIGKKKFETLSYLPDL+D ELAKEVDYL+RNKWIPCVEFELEHGFVYREHG++PGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGR 120
Query: 375 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFT 199
YWTMWKLPLFGCTDSAQVLKEV+ECKKEYPNAFIRIIGFDN RQVQCISFIAYKPPSFT
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPPSFT 179
>TAIR9_protein||AT5G38410.2 | Symbols: | ribulose bisphosphate carboxylase
small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) |
chr5:15377501-15378306 REVERSE
Length = 175
Score = 336 bits (861), Expect = 1e-092
Identities = 164/182 (90%), Positives = 168/182 (92%), Gaps = 7/182 (3%)
Frame = -1
Query: 735 MAYSMLSSAAVVTSPAQTTMVAPFTGLKSSAAFPVTQKANNDITSIASNGGRVSCMKVWP 556
MA SMLSSAAVVTSPAQ TMVAPFTGLKSSAAFPVT+K N DITSIASNGGRVSCMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWP 60
Query: 555 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 376
PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFEL EHG+TPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFEL-------EHGNTPGYYDGR 113
Query: 375 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 196
YWTMWKLPLFGCTDSAQVLKEV+ECKKEYP AFIRIIGFDN RQVQCISFIAYKPPSFT+
Sbjct: 114 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTE 173
Query: 195 A* 190
A*
Sbjct: 174 A* 175
>TAIR9_protein||AT1G67090.2 | Symbols: RBCS1A | RBCS1A (RIBULOSE BISPHOSPHATE
CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bisphosphate
carboxylase | chr1:25048590-25049249 REVERSE
Length = 137
Score = 178 bits (451), Expect = 3e-045
Identities = 85/102 (83%), Positives = 93/102 (91%)
Frame = -1
Query: 735 MAYSMLSSAAVVTSPAQTTMVAPFTGLKSSAAFPVTQKANNDITSIASNGGRVSCMKVWP 556
MA SMLSSA +V SPAQ TMVAPF GLKSSAAFP T+KANNDITSI SNGGRV+CM+VWP
Sbjct: 1 MASSMLSSATMVASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWP 60
Query: 555 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELE 430
PIGKKKFETLSYLPDL+D ELAKEVDYL+RNKWIPCVEF+ +
Sbjct: 61 PIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFDTD 102
Score = 61 bits (146), Expect = 8e-010
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -2
Query: 434 WSTDLCTVSTEAHPDTTMAVTGQCGSFPCSDALTLLKC* 318
+ TDLCTVST HPDT M TGQCGSFPCS A T LKC*
Sbjct: 99 FDTDLCTVSTVTHPDTMMDGTGQCGSFPCSVAPTPLKC* 137
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,282,326,151
Number of Sequences: 33410
Number of Extensions: 10282326151
Number of Successful Extensions: 343552827
Number of sequences better than 0.0: 0
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