BLASTX 7.6.2
Query= UN22675 /QuerySize=978
(977 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G46820.1 | Symbols: PTAC8, TMP14, PSAP, PSI-P ... 265 3e-071
TAIR9_protein||AT2G46820.2 | Symbols: PTAC8, TMP14, PSAP, PSI-P ... 265 3e-071
TAIR9_protein||AT1G52220.1 | Symbols: | FUNCTIONS IN: molecular... 94 2e-019
TAIR9_protein||AT1G52220.2 | Symbols: | FUNCTIONS IN: molecular... 89 4e-018
TAIR9_protein||AT4G01150.1 | Symbols: | unknown protein | chr4:... 83 2e-016
TAIR9_protein||AT4G38100.1 | Symbols: | unknown protein | chr4:... 67 1e-011
TAIR9_protein||AT1G52220.3 | Symbols: | FUNCTIONS IN: molecular... 55 8e-008
>TAIR9_protein||AT2G46820.1 | Symbols: PTAC8, TMP14, PSAP, PSI-P | PSI-P
(PHOTOSYSTEM I P SUBUNIT); DNA binding | chr2:19243729-19244870
FORWARD
Length = 175
Score = 265 bits (677), Expect = 3e-071
Identities = 140/185 (75%), Positives = 157/185 (84%), Gaps = 13/185 (7%)
Frame = +2
Query: 182 MASLSVSSSSTIIDSRAPP--LPSRQASSPSCISLPTLPPQPLQSQTRAAKATAYCRKIV 355
MASLSVSSSSTIIDSRAPP L S ASSPSCISLPTL P+QS TRAAKATAYCRKIV
Sbjct: 1 MASLSVSSSSTIIDSRAPPSRLASASASSPSCISLPTL---PIQSHTRAAKATAYCRKIV 57
Query: 356 RNVLTRAADVEVVATTQV-EAPAANTEAASTELPDIVKTVQEAWDKVEDKYAVSSLAVSG 532
RNV+TR ATT+V EAPA TEA +TELP+IVKT QEAW+KV+DKYA+ SLA +G
Sbjct: 58 RNVVTR-------ATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAG 110
Query: 533 FVALWGTAGVISAIDRLPLVPGVLEVVGIGYTGWFAYKNLIFKPDRETLFQKVKDTYRDI 712
VALWG+AG+ISAIDRLPLVPGVLE+VGIGYTGWF YKNL+FKPDRE LF+KVK TY+DI
Sbjct: 111 VVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDI 170
Query: 713 IGSN* 727
+GS+*
Sbjct: 171 LGSS* 175
>TAIR9_protein||AT2G46820.2 | Symbols: PTAC8, TMP14, PSAP, PSI-P | PSI-P
(PHOTOSYSTEM I P SUBUNIT); DNA binding | chr2:19243729-19244870
FORWARD
Length = 175
Score = 265 bits (677), Expect = 3e-071
Identities = 140/185 (75%), Positives = 157/185 (84%), Gaps = 13/185 (7%)
Frame = +2
Query: 182 MASLSVSSSSTIIDSRAPP--LPSRQASSPSCISLPTLPPQPLQSQTRAAKATAYCRKIV 355
MASLSVSSSSTIIDSRAPP L S ASSPSCISLPTL P+QS TRAAKATAYCRKIV
Sbjct: 1 MASLSVSSSSTIIDSRAPPSRLASASASSPSCISLPTL---PIQSHTRAAKATAYCRKIV 57
Query: 356 RNVLTRAADVEVVATTQV-EAPAANTEAASTELPDIVKTVQEAWDKVEDKYAVSSLAVSG 532
RNV+TR ATT+V EAPA TEA +TELP+IVKT QEAW+KV+DKYA+ SLA +G
Sbjct: 58 RNVVTR-------ATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAG 110
Query: 533 FVALWGTAGVISAIDRLPLVPGVLEVVGIGYTGWFAYKNLIFKPDRETLFQKVKDTYRDI 712
VALWG+AG+ISAIDRLPLVPGVLE+VGIGYTGWF YKNL+FKPDRE LF+KVK TY+DI
Sbjct: 111 VVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDI 170
Query: 713 IGSN* 727
+GS+*
Sbjct: 171 LGSS* 175
>TAIR9_protein||AT1G52220.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 203 Blast hits to 203 proteins in 35 species:
Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 136;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 157
Score = 94 bits (231), Expect = 2e-019
Identities = 54/156 (34%), Positives = 91/156 (58%), Gaps = 11/156 (7%)
Frame = +2
Query: 275 SLPTLPPQPLQSQTRAAKATAYCRKIVRNVLTRAADVEVVATTQ--------VEAPAANT 430
S+ P PL R + T+ +K+ ++ D+ ++ T+ V+A ++
Sbjct: 3 SISATLPSPLLLTQRKSNLTS-IQKLPFSLTRGTNDLSPLSLTRNPSSISLMVKASGESS 61
Query: 431 EAASTELPDIVKTVQEAWDKVEDKYAVSSLAVSGFVALWGTAGVISAIDRLPLVPGVLEV 610
+ +ST+L D+V T+Q WDK ED+ + L +G VALW + +I+AID+LP++ E+
Sbjct: 62 D-SSTDL-DVVSTIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFEL 119
Query: 611 VGIGYTGWFAYKNLIFKPDRETLFQKVKDTYRDIIG 718
VGI ++ WF Y+ L+FKPDR+ L + VK + DI+G
Sbjct: 120 VGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILG 155
>TAIR9_protein||AT1G52220.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 203 Blast hits to 203 proteins in 35 species:
Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 136;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 156
Score = 89 bits (219), Expect = 4e-018
Identities = 54/156 (34%), Positives = 91/156 (58%), Gaps = 12/156 (7%)
Frame = +2
Query: 275 SLPTLPPQPLQSQTRAAKATAYCRKIVRNVLTRAADVEVVATTQ--------VEAPAANT 430
S+ P PL R + T+ +K+ ++ D+ ++ T+ V+A ++
Sbjct: 3 SISATLPSPLLLTQRKSNLTS-IQKLPFSLTRGTNDLSPLSLTRNPSSISLMVKASGESS 61
Query: 431 EAASTELPDIVKTVQEAWDKVEDKYAVSSLAVSGFVALWGTAGVISAIDRLPLVPGVLEV 610
+ +ST+L D+V T+Q WDK ED+ + L +G VALW + +I+AID+LP++ E+
Sbjct: 62 D-SSTDL-DVVSTIQN-WDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFEL 118
Query: 611 VGIGYTGWFAYKNLIFKPDRETLFQKVKDTYRDIIG 718
VGI ++ WF Y+ L+FKPDR+ L + VK + DI+G
Sbjct: 119 VGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILG 154
>TAIR9_protein||AT4G01150.1 | Symbols: | unknown protein | chr4:493692-494668
FORWARD
Length = 165
Score = 83 bits (204), Expect = 2e-016
Identities = 37/103 (35%), Positives = 65/103 (63%)
Frame = +2
Query: 419 AANTEAASTELPDIVKTVQEAWDKVEDKYAVSSLAVSGFVALWGTAGVISAIDRLPLVPG 598
A++ E +S + +++ ++E WD +E+K V VA+W ++ V+ AI+ +PL+P
Sbjct: 63 ASSEETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPK 122
Query: 599 VLEVVGIGYTGWFAYKNLIFKPDRETLFQKVKDTYRDIIGSN* 727
V+E+VG+GYTGWF Y+ L+FK R+ L + ++ + I GS *
Sbjct: 123 VMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE* 165
>TAIR9_protein||AT4G38100.1 | Symbols: | unknown protein |
chr4:17887033-17888177 REVERSE
Length = 194
Score = 67 bits (163), Expect = 1e-011
Identities = 36/105 (34%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Frame = +2
Query: 410 EAPAANTEAASTELPDIVKTVQEAWDKVEDKYAVSSLAVSGFVALWGTAGVISAIDRLPL 589
EAP A E T+ + + ++ DK Y++ VAL+ T+ ++S+++ +PL
Sbjct: 92 EAPQAEDE--ETQALEFLNDIKLDSDKT---YSILLYGSGAIVALYLTSAIVSSLEAIPL 146
Query: 590 VPGVLEVVGIGYTGWFAYKNLIFKPDRETLFQKVKDTYRDIIGSN 724
P ++EVVG+GYT WF + L+FK +RE L KV + + ++GS+
Sbjct: 147 FPKLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSD 191
>TAIR9_protein||AT1G52220.3 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 172 Blast hits to 172 proteins in 28 species:
Archae - 0; Bacteria - 44; Metazoa - 0; Fungi - 0; Plants - 127;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 128
Score = 55 bits (130), Expect = 8e-008
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +2
Query: 569 AIDRLPLVPGVLEVVGIGYTGWFAYKNLIFKPDRETLFQKVKDTYRDIIG 718
AID+LP++ E+VGI ++ WF Y+ L+FKPDR+ L + VK + DI+G
Sbjct: 77 AIDKLPVISSGFELVGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILG 126
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,693,113,993
Number of Sequences: 33410
Number of Extensions: 11693113993
Number of Successful Extensions: 375734917
Number of sequences better than 0.0: 0
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