BLASTX 7.6.2
Query= UN08713 /QuerySize=875
(874 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 314 6e-086
TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 314 6e-086
TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 307 8e-084
TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 151 5e-037
TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 150 1e-036
TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 150 2e-036
TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 149 3e-036
TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 149 3e-036
TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 122 3e-028
TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 119 3e-027
TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 119 3e-027
TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 118 5e-027
TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcripti... 112 4e-025
TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 |... 97 2e-020
TAIR9_protein||AT2G34450.1 | Symbols: | high mobility group (HM... 93 2e-019
TAIR9_protein||AT5G63740.1 | Symbols: | zinc finger protein-rel... 60 2e-009
TAIR9_protein||AT5G15140.1 | Symbols: | aldose 1-epimerase fami... 57 1e-008
TAIR9_protein||AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant ... 51 7e-007
TAIR9_protein||AT1G48400.1 | Symbols: | F-box family protein | ... 50 1e-006
>TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 314 bits (803), Expect = 6e-086
Identities = 153/179 (85%), Positives = 168/179 (93%)
Frame = +1
Query: 103 MKTAKGKGKAKTTKEALKPVDDRKVGKRKAPAEKPSKRETRKEKKAKKDPNKPKRAPSAF 282
MKTAKGK K KTTKEALKPVDDRKVGKRKAPAEKP+KRETRKEKKAKKDPNKPKRAPSAF
Sbjct: 1 MKTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAF 60
Query: 283 FVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDA 462
FVFLEDFR TFKKENP+VKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEK MDA
Sbjct: 61 FVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDA 120
Query: 463 YNKSMEEGSDESENSLSEVNDEDEASEEEEKVKKGKAGEDDDDDDEDDDDDEDDEEED* 639
YNK++EEGSDESE S SE+NDEDEAS EEE ++K AG+D+++++E+DDDD+DDEEED*
Sbjct: 121 YNKNLEEGSDESEKSRSEINDEDEASGEEELLEKEAAGDDEEEEEEEDDDDDDDEEED* 179
>TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 314 bits (803), Expect = 6e-086
Identities = 153/179 (85%), Positives = 168/179 (93%)
Frame = +1
Query: 103 MKTAKGKGKAKTTKEALKPVDDRKVGKRKAPAEKPSKRETRKEKKAKKDPNKPKRAPSAF 282
MKTAKGK K KTTKEALKPVDDRKVGKRKAPAEKP+KRETRKEKKAKKDPNKPKRAPSAF
Sbjct: 1 MKTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAF 60
Query: 283 FVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDA 462
FVFLEDFR TFKKENP+VKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEK MDA
Sbjct: 61 FVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDA 120
Query: 463 YNKSMEEGSDESENSLSEVNDEDEASEEEEKVKKGKAGEDDDDDDEDDDDDEDDEEED* 639
YNK++EEGSDESE S SE+NDEDEAS EEE ++K AG+D+++++E+DDDD+DDEEED*
Sbjct: 121 YNKNLEEGSDESEKSRSEINDEDEASGEEELLEKEAAGDDEEEEEEEDDDDDDDEEED* 179
>TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 186
Score = 307 bits (785), Expect = 8e-084
Identities = 153/186 (82%), Positives = 168/186 (90%), Gaps = 7/186 (3%)
Frame = +1
Query: 103 MKTAKGKGKAKTTKEALKPVDDRKVGKRKAPAEKPSKRETRKEKKAKKDPNKPKRAPSAF 282
MKTAKGK K KTTKEALKPVDDRKVGKRKAPAEKP+KRETRKEKKAKKDPNKPKRAPSAF
Sbjct: 1 MKTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAF 60
Query: 283 FVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDA 462
FVFLEDFR TFKKENP+VKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEK MDA
Sbjct: 61 FVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDA 120
Query: 463 YNKSMEEGSDESENSLSEVNDEDEASEE-------EEKVKKGKAGEDDDDDDEDDDDDED 621
YNK++EEGSDESE S SE+NDEDEAS E EE ++K AG+D+++++E+DDDD+D
Sbjct: 121 YNKNLEEGSDESEKSRSEINDEDEASGEVTIPLSNEELLEKEAAGDDEEEEEEEDDDDDD 180
Query: 622 DEEED* 639
DEEED*
Sbjct: 181 DEEED* 186
>TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181170 FORWARD
Length = 141
Score = 151 bits (381), Expect = 5e-037
Identities = 74/122 (60%), Positives = 95/122 (77%), Gaps = 3/122 (2%)
Frame = +1
Query: 208 SKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSM 387
+K+ + K A KDPNKPKR SAFFVF+EDFR T+K+E+P K+V+AVGKAGG+KWKS+
Sbjct: 18 TKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSL 77
Query: 388 SQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENSLSEVNDEDEASEEEEKV 558
S +EKAPY KA KRK EYEK M AYNK +EEG +ES+ S+SEVNDED+A + E+V
Sbjct: 78 SDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGSEEV 137
Query: 559 KK 564
++
Sbjct: 138 RR 139
>TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 145
Score = 150 bits (378), Expect = 1e-036
Identities = 80/124 (64%), Positives = 94/124 (75%), Gaps = 7/124 (5%)
Frame = +1
Query: 199 EKPSKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKW 378
+KP+K R K A KDPNKPKR SAFFVF+EDFR+TFKKENP K+V+ VGKA G KW
Sbjct: 19 KKPAKGAGR-GKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKW 77
Query: 379 KSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENSLSEVNDEDEA---S 540
KS+S +EKAPY KA KRK EYEK + AYNK +EEG +ES+ S+SEVNDED+A S
Sbjct: 78 KSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGS 137
Query: 541 EEEE 552
EEEE
Sbjct: 138 EEEE 141
>TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181174 FORWARD
Length = 142
Score = 150 bits (377), Expect = 2e-036
Identities = 77/121 (63%), Positives = 94/121 (77%), Gaps = 6/121 (4%)
Frame = +1
Query: 208 SKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSM 387
+K+ + K A KDPNKPKR SAFFVF+EDFR T+K+E+P K+V+AVGKAGG+KWKS+
Sbjct: 18 TKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSL 77
Query: 388 SQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENSLSEVNDEDEA---SEEE 549
S +EKAPY KA KRK EYEK M AYNK +EEG +ES+ S+SEVNDED+A SEEE
Sbjct: 78 SDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGSEEE 137
Query: 550 E 552
E
Sbjct: 138 E 138
>TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 144
Score = 149 bits (375), Expect = 3e-036
Identities = 79/124 (63%), Positives = 94/124 (75%), Gaps = 7/124 (5%)
Frame = +1
Query: 199 EKPSKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKW 378
+KP+K R K A KDPNKPKR SAFFVF+EDFR+TFKKENP K+V+ VGKA G KW
Sbjct: 19 KKPAKGAGR-GKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKW 77
Query: 379 KSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENSLSEVNDEDEA---S 540
KS+S +EKAPY KA KRK EYEK + AYNK +EEG +ES+ S+SEVNDED+A S
Sbjct: 78 KSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGS 137
Query: 541 EEEE 552
EEE+
Sbjct: 138 EEED 141
>TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 143
Score = 149 bits (374), Expect = 3e-036
Identities = 76/122 (62%), Positives = 92/122 (75%), Gaps = 4/122 (3%)
Frame = +1
Query: 199 EKPSKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKW 378
+KP+K R K A KDPNKPKR SAFFVF+EDFR+TFKKENP K+V+ VGKA G KW
Sbjct: 19 KKPAKGAGR-GKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKW 77
Query: 379 KSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENSLSEVNDEDEASEEE 549
KS+S +EKAPY KA KRK EYEK + AYNK +EEG +ES+ S+SEVNDED+A +
Sbjct: 78 KSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGS 137
Query: 550 EK 555
E+
Sbjct: 138 EE 139
>TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181193 FORWARD
Length = 148
Score = 122 bits (305), Expect = 3e-028
Identities = 58/90 (64%), Positives = 71/90 (78%)
Frame = +1
Query: 208 SKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSM 387
+K+ + K A KDPNKPKR SAFFVF+EDFR T+K+E+P K+V+AVGKAGG+KWKS+
Sbjct: 18 TKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSL 77
Query: 388 SQAEKAPYEEKAAKRKAEYEKLMDAYNKSM 477
S +EKAPY KA KRK EYEK M AYNK +
Sbjct: 78 SDSEKAPYVAKADKRKVEYEKNMKAYNKKL 107
>TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 139
Score = 119 bits (297), Expect = 3e-027
Identities = 69/135 (51%), Positives = 86/135 (63%), Gaps = 11/135 (8%)
Frame = +1
Query: 172 KVGKRKAPAEKPSKR-ETRKE---KKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVK 339
K G+ KA A +R +TR KK KKDPN+PKR PSAFFVFLEDFR+ F NP+ K
Sbjct: 2 KGGESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNK 61
Query: 340 AVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGS----DESENS 507
+V+ VGKA G +WK+M+ +KAPY KA RK EY K + YN + G+ D+S+ S
Sbjct: 62 SVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDKS 121
Query: 508 LSEVNDEDEASEEEE 552
SEV DEA EEE
Sbjct: 122 KSEV---DEAVSEEE 133
>TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 139
Score = 119 bits (297), Expect = 3e-027
Identities = 69/135 (51%), Positives = 86/135 (63%), Gaps = 11/135 (8%)
Frame = +1
Query: 172 KVGKRKAPAEKPSKR-ETRKE---KKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVK 339
K G+ KA A +R +TR KK KKDPN+PKR PSAFFVFLEDFR+ F NP+ K
Sbjct: 2 KGGESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNK 61
Query: 340 AVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGS----DESENS 507
+V+ VGKA G +WK+M+ +KAPY KA RK EY K + YN + G+ D+S+ S
Sbjct: 62 SVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDKS 121
Query: 508 LSEVNDEDEASEEEE 552
SEV DEA EEE
Sbjct: 122 KSEV---DEAVSEEE 133
>TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 135
Score = 118 bits (295), Expect = 5e-027
Identities = 67/134 (50%), Positives = 87/134 (64%), Gaps = 9/134 (6%)
Frame = +1
Query: 172 KVGKRKAPAEKPSKR-ETRKE---KKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVK 339
K G+ KA A +R +TR KK KKDPN+PKR PSAFFVFLEDFR+ F NP+ K
Sbjct: 2 KGGESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNK 61
Query: 340 AVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGS----DESENS 507
+V+ VGKA G +WK+M+ +KAPY KA RK EY K + YN + G+ D+S+ S
Sbjct: 62 SVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDKS 121
Query: 508 LSEVNDEDEASEEE 549
SEV DE EA +++
Sbjct: 122 KSEV-DEAEAEDDD 134
>TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcription factor |
chr5:7888712-7890111 REVERSE
Length = 242
Score = 112 bits (279), Expect = 4e-025
Identities = 66/168 (39%), Positives = 103/168 (61%), Gaps = 6/168 (3%)
Frame = +1
Query: 133 KTTKEALKPVDDRKVGKRKAPAEKPSK-RETRKEKKAKKDPNKPKRAPSAFFVFLEDFRQ 309
+T EA K ++K K + KP + ++T EKK+ NKPKR +AFF+F+ DFR+
Sbjct: 74 ETQAEAKKKPAEKK--KTTSDGPKPKRLKKTNDEKKSSSTSNKPKRPLTAFFIFMSDFRK 131
Query: 310 TFKKENPDVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGS 489
TFK E+ A A K GG+KWKS+++ EK Y +KAA+ KAEY K +++ N + EE
Sbjct: 132 TFKSEHNGSLAKDA-AKIGGEKWKSLTEEEKKVYLDKAAELKAEYNKSLES-NDADEEEE 189
Query: 490 DESENSLSEVNDEDEASEEEEKVKKGKAGEDDDDDDEDDDDDEDDEEE 633
DE + S +V+D +E +++ + K E+ DDD ++ + E++EEE
Sbjct: 190 DEEKQS-DDVDDAEEKQVDDDDEVEEKEVENTDDDKKEAEGKEEEEEE 236
>TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 | HMGB5 (HIGH
MOBILITY GROUP B 5); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor |
chr4:16887363-16888184 REVERSE
Length = 126
Score = 97 bits (239), Expect = 2e-020
Identities = 43/88 (48%), Positives = 59/88 (67%)
Frame = +1
Query: 226 KEKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSMSQAEKA 405
K K KDPN+PK+ PS FFVFL+DFR+ F NPD K+V VG+A G+KWK+M++ E+A
Sbjct: 23 KVGKKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKWKTMTEEERA 82
Query: 406 PYEEKAAKRKAEYEKLMDAYNKSMEEGS 489
P+ K+ +K EY M YN + G+
Sbjct: 83 PFVAKSQSKKTEYAVTMQQYNMELANGN 110
>TAIR9_protein||AT2G34450.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr2:14527918-14529448 REVERSE
Length = 152
Score = 93 bits (229), Expect = 2e-019
Identities = 49/129 (37%), Positives = 77/129 (59%), Gaps = 5/129 (3%)
Frame = +1
Query: 124 GKAKTTKEALKPVDD--RKVGKRKAPAEKPSKRETRKEKKAKKDPNKPKRAPSAFFVFLE 297
G ++ + A+K + R R P KP + + K+K K PK+ +AFF FL+
Sbjct: 18 GSSRNLELAVKSSEGARRSTRLRLQPLRKP--KTSPKKKPVKLQTKMPKKPATAFFFFLD 75
Query: 298 DFRQTFKKENPDVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSM 477
DFR+ +++ENPDVK++ +GK G+KWK+M+ EK Y + A +++ E+ + M Y K M
Sbjct: 76 DFRKQYQEENPDVKSMREIGKTCGEKWKTMTYEEKVKYYDIATEKREEFHRAMTEYTKRM 135
Query: 478 EEGS-DESE 501
E G+ DESE
Sbjct: 136 ESGAHDESE 144
>TAIR9_protein||AT5G63740.1 | Symbols: | zinc finger protein-related |
chr5:25510776-25511456 REVERSE
Length = 227
Score = 60 bits (144), Expect = 2e-009
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +1
Query: 439 EYEKLMDAYNKSMEEGSDESENSLSEVNDEDEASEEEEKVKKGKAGEDDDDDDEDDD-DD 615
EY K+ D +N EG + + E DED ++E+E + + +DDDDDD+DDD DD
Sbjct: 47 EYIKVYDDHNND-GEGDGDGDGDGDEDEDEDADADEDEDEDEDEDDDDDDDDDDDDDADD 105
Query: 616 EDDEEED*TGDRDQSLDLEDN 678
DD+E+D D D+ D +D+
Sbjct: 106 ADDDEDDDDEDDDEDEDDDDD 126
Score = 53 bits (125), Expect = 3e-007
Identities = 22/69 (31%), Positives = 42/69 (60%)
Frame = +1
Query: 478 EEGSDESENSLSEVNDEDEASEEEEKVKKGKAGEDDDDDDEDDDDDEDDEEED*TGDRDQ 657
E+ + + E D+D+ ++++ A +D+DDDDEDDD+DEDD+++D + ++
Sbjct: 75 EDADADEDEDEDEDEDDDDDDDDDDDDDADDADDDEDDDDEDDDEDEDDDDDDDDENDEE 134
Query: 658 SLDLEDNYR 684
D D++R
Sbjct: 135 CDDEYDSHR 143
>TAIR9_protein||AT5G15140.1 | Symbols: | aldose 1-epimerase family protein |
chr5:4908686-4910670 FORWARD
Length = 491
Score = 57 bits (137), Expect = 1e-008
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Frame = +1
Query: 319 KENPDVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGSDES 498
K++ V S + GG+K ++ +++ K +K NK ++
Sbjct: 39 KKDKKVDHDSTHKEKGGEKVDGAGSDDEDNDKKEKKKEHDVQKKDKQHENKDKDDEKKHV 98
Query: 499 ENSLSEVNDEDEASEEEEKVKKGKAGEDDDDDDEDDDDDEDDEEED*TGDRDQSLDLEDN 678
+ S +D+D+ E++ K KK DDDD D+D DDD+DD+++D D D +D +DN
Sbjct: 99 DKKKSGGHDKDDDDEKKHKDKKKDGHNDDDDSDDDTDDDDDDDDDD---DDDDEVDGDDN 155
>TAIR9_protein||AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis
thaliana protein match is: EMB2758 (embryo defective 2758)
(TAIR:AT4G33990.1); Has 45368 Blast hits to 16108 proteins in 635
species: Archae - 60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967 (source: NCBI
BLink). | chr3:18212187-18217848 REVERSE
Length = 1216
Score = 51 bits (121), Expect = 7e-007
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +1
Query: 448 KLMDAYNKSMEEGSDESENSLSEVNDEDEASEEEEKVKKGKAGEDDDDDDEDDDDDEDDE 627
+LM + E DES + SE EDE EE + + + +DDDDDD+D+DDD+ D
Sbjct: 916 ELMGLSDSDFETEDDESGDDDSEDTGEDEDEEEWVAILEDEDEDDDDDDDDDEDDDDSDS 975
Query: 628 EE 633
+E
Sbjct: 976 DE 977
>TAIR9_protein||AT1G48400.1 | Symbols: | F-box family protein |
chr1:17882136-17883855 REVERSE
Length = 514
Score = 50 bits (119), Expect = 1e-006
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 496 SENSLSEVNDEDEASEEEEKVKKGKAGEDDDDDDEDDDDDEDDEEED*TGD 648
S N +D+D+ ++++ +DDDDDD+DDDDD+DD+++D GD
Sbjct: 277 STNDYDYSDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDGD 327
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,940,565,389
Number of Sequences: 33410
Number of Extensions: 4940565389
Number of Successful Extensions: 184278111
Number of sequences better than 0.0: 0
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